Description
This panel contains genes that cause miscellaneous metabolic disorders, that are not present on any of the more specific metabolic disorders panels (see the Metabolic Disorders Superpanel for the full list of panels). It contains, but is not limited to, the following groups of conditions:
-Disorders of purine and pyrimidine metabolism
-Organic acidurias, and other disorders of amino acid and peptide metabolism
-Disorders of bile acid metabolism and transport, and other disorders of the metabolism of sterols
-Disorders of nucleotide metabolism
-Disorders of glucose transport, and other disorders of carbohydrate metabolism (excluding glycogen storage disorders)
-Disorders of zinc and manganese metabolism
-Disorders of vitamins and cofactors

This panel is a component of the Metabolic Disorders Superpanel.

14 reviewers

  • Kristin Rigbye (Victorian Clinical Genetics Services)

  • Alison Yeung (Victorian Clinical Genetics Services)

  • Eleanor Williams (Genomics England)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Hazel Phillimore (Victorian Clinical Genetics Services)

  • Melanie Marty (Victorian Clinical Genetics Services)

  • Bryony Thompson (Royal Melbourne Hospital)

  • Chern Lim (Victorian Clinical Genetics Services)

  • Lucy Spencer (Victorian Clinical Genetics Services)

  • Elena Savva (Victorian Clinical Genetics Services)

  • Crystle Lee (Victorian Clinical Genetics Services)

  • Krithika Murali (Pathology Queensland)

  • Zornitza Stark (Victorian Clinical Genetics Services)

  • chirag patel (Genetic Health Queensland)

150 Entities

150 reviewed, 125 green

List Entity Reviews Mode of inheritance Details
150 Entitiess
Green Green List (high evidence)
ABCB11
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cholestasis, progressive familial intrahepatic 2 MIM#601847
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
ABCB4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Progressive familial intrahepatic cholestasis type 3, MONDO:0011214
Tags
Green Green List (high evidence)
ABHD12
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Polyneuropathy, hearing loss, ataxia, retinitis pigmentosa, and cataract MIM#612674
  • disorder of of endocannabinoid metabolism
Tags
Green Green List (high evidence)
ABHD5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Chanarin-Dorfman syndrome MIM#275630
  • neutral lipid storage disease with ichthyosis
  • lipid metabolism
Tags
Green Green List (high evidence)
ACY1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Aminoacylase 1 deficiency MIM#609924
  • disorder of amino acid metabolism
Tags
Green Green List (high evidence)
ADA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Adenosine deaminase deficiency, partial MIM#102700
  • Severe combined immunodeficiency due to ADA deficiency MIM#102700
  • disorder of purine metabolism
Tags
Green Green List (high evidence)
ADSL
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Adenylosuccinase deficiency MIM#103050
  • disorder of purine metabolism
Tags
Green Green List (high evidence)
AHCY
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase MIM#613752
  • disorder of methionine metabolism
Tags
  • treatable
Green Green List (high evidence)
AKR1D1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Bile acid synthesis defect, congenital, 2 MIM#235555
  • disorder of bile acid metabolism
Tags
  • treatable
Green Green List (high evidence)
ALDH18A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cutis laxa, autosomal recessive, type IIIA MIM#219150
  • Spastic paraplegia 9A, autosomal dominant MIM#601162
  • Spastic paraplegia 9B, autosomal recessive MIM#616586
  • Cutis laxa, autosomal dominant 3 MIM#616603
  • disorders of ornithine or proline metabolism
Tags
Green Green List (high evidence)
ALDH3A2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Sjogren-Larsson syndrome MIM#270200
  • disorder of lipid metabolism
Tags
Green Green List (high evidence)
ALDH4A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hyperprolinemia, type II MIM#239510
  • disorders of ornithine or proline metabolism
Tags
Green Green List (high evidence)
ALDH5A1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Succinic semialdehyde dehydrogenase deficiency MIM#271980
  • disorder of neurotransmitter metabolism
Tags
Green Green List (high evidence)
ALDH6A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Methylmalonate semialdehyde dehydrogenase deficiency MIM#614105
  • disorder of valine and pyrimidine metabolism
Tags
Green Green List (high evidence)
ALDH7A1
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Epilepsy, pyridoxine-dependent MM#266100
  • disorder of lysine metabolism
Tags
  • treatable
Green Green List (high evidence)
ALDOB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Fructose intolerance, hereditary, MIM# 229600
Tags
Green Green List (high evidence)
ALPL
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypophosphatasia
  • disorder of bone metabolism
Tags
Green Green List (high evidence)
AMT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glycine encephalopathy MIM#605899
  • disorder of glycine metabolism
Tags
Green Green List (high evidence)
ARG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Argininemia MIM#207800
  • Urea cycle disorders and inherited hyperammonaemias
  • disorder of arginine metabolism
Tags
  • treatable
Green Green List (high evidence)
ASL
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Argininosuccinic aciduria MIM#207900
  • Urea cycle disorders and inherited hyperammonaemias
  • disorder of amino acid metabolism
Tags
  • treatable
Green Green List (high evidence)
ASPA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Canavan disease MIM#271900
  • disorder of amino acid metabolism
Tags
Green Green List (high evidence)
ASS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Citrullinemia MIM#215700
  • Urea cycle disorders and inherited hyperammonaemias
  • disorder of amino acid metabolism
Tags
  • treatable
Green Green List (high evidence)
ATIC
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • AICA-ribosiduria due to ATIC deficiency MIM#608688
  • disorders of purine metabolism
Tags
Green Green List (high evidence)
ATP7A
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Menkes disease MIM#309400
  • Occipital horn syndrome MIM#304150
  • disorder of copper matabolism
Tags
Green Green List (high evidence)
ATP8B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cholestasis, progressive familial intrahepatic 1 MIM#211600
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
BAAT
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Bile acid conjugation defect 1, MIM# 619232
  • Hypercholanemia, familial MIM#607748
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
BTD
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Biotinidase deficiency MIM#253260
  • disorder of biotin metabolism
Tags
  • treatable
Green Green List (high evidence)
CBS
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Homocystinuria, B6-responsive and nonresponsive types MIM#236200
  • disorder of intracellular cobalamin metabolism
  • metabolic disorder of sulfur metabolism
Tags
  • treatable
Green Green List (high evidence)
CTSC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Haim-Munk syndrome MIM#245010
  • Papillon-Lefevre syndrome MIM#245000
  • other lysosomal disorder
Tags
Green Green List (high evidence)
CYP27A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cerebrotendinous xanthomatosis MIM#213700
  • Disorders of bile acid biosynthesis
Tags
Green Green List (high evidence)
CYP7B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Bile acid synthesis defect, congenital, 3 MIM#613812
  • Spastic paraplegia 5A, autosomal recessive MIM#270800
  • Disorders of bile acid biosynthesis
Tags
Green Green List (high evidence)
DHCR24
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Desmosterolosis, MONDO:0011217
Tags
Green Green List (high evidence)
DHCR7
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Smith-Lemli-Opitz syndrome MIM#270400
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
DHODH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Miller syndrome MIM#263750
  • Disorders of pyrimidine metabolism
Tags
Green Green List (high evidence)
DHTKD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • 2-aminoadipic 2-oxoadipic aciduria MONDO:0008774
Tags
Green Green List (high evidence)
DPYD
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Dihydropyrimidine dehydrogenase deficiency MIM#274270
  • 5-fluorouracil toxicity MIM#274270
  • Disorders of pyrimidine metabolism
Tags
  • pharmacogenomic
Green Green List (high evidence)
DPYS
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Dihydropyrimidinuria MIM#222748
  • Disorders of pyrimidine metabolism
Tags
Green Green List (high evidence)
EPG5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Vici syndrome MIM#242840
  • Congenital disorders of autophagy
Tags
Green Green List (high evidence)
FDFT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • squalene synthase deficiency MONDO:0032566
Tags
Green Green List (high evidence)
FMO3
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Trimethylaminuria MIM#602079
  • Disorders and variants of other enzymes that oxidise xenobiotics
Tags
Green Green List (high evidence)
FTCD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glutamate formiminotransferase deficiency MIM#229100
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Green Green List (high evidence)
GALE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Galactose epimerase deficiency MIM#230350
  • Disorders of galactose metabolism
Tags
  • treatable
Green Green List (high evidence)
GALK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Galactokinase deficiency with cataracts MIM#230200
  • Disorders of galactose metabolism
Tags
  • treatable
Green Green List (high evidence)
GALM
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Galactosemia IV MIM#618881
  • Disorders of galactose metabolism
Tags
Green Green List (high evidence)
GALT
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Galactosemia MIM#230400
  • Disorders of galactose metabolism
Tags
  • treatable
Green Green List (high evidence)
GAMT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cerebral creatine deficiency syndrome 2 MIM#612736
  • Disorders of creatinine metabolism
Tags
  • treatable
Green Green List (high evidence)
GATM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cerebral creatine deficiency syndrome 3 MIM#612718
Tags
Green Green List (high evidence)
GCDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glutaricaciduria, type I MIM#231670
  • Organic acidurias
Tags
  • treatable
Green Green List (high evidence)
GCLC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency MIM#230450
  • Disorders of the gamma-glutamyl cycle
Tags
Green Green List (high evidence)
GK
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glycerol kinase deficiency MIM#307030
  • Disorders of glycerol metabolism
Tags
Green Green List (high evidence)
GLDC
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glycine encephalopathy MIM#605899
  • Disorders of serine, glycine or glycerate metabolism
Tags
Green Green List (high evidence)
GLS
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Disease associations
  • Developmental and epileptic encephalopathy 71 MIM#618328
  • Global developmental delay, progressive ataxia, and elevated glutamine MIM#618412
  • disorder of amino acid metabolism
Tags
Green Green List (high evidence)
GLS_GDPAG_GCA
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Global developmental delay, progressive ataxia, and elevated glutamine MIM#618412
Tags
Green Green List (high evidence)
GLUL
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glutamine deficiency, congenital MIM#610015
  • Developmental and epileptic encephalopathy 116, MIM# 620806
Tags
Green Green List (high evidence)
GLYCTK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • D-glyceric aciduria MIM#220120
  • Disorders of serine, glycine or glycerate metabolism
Tags
Green Green List (high evidence)
GNMT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glycine N-methyltransferase deficiency MIM#606664
  • Disorders of the metabolism of sulphur amino acids
Tags
Green Green List (high evidence)
GPD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypertriglyceridemia, transient infantile MIM#614480
  • glycerol-3-phosphate dehydrogenase deficiency
Tags
Green Green List (high evidence)
GPHN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Molybdenum cofactor deficiency C MIM#615501
  • Disorders of molybdenum cofactor metabolism
Tags
Green Green List (high evidence)
GSS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Glutathione synthetase deficiency MIM#266130
  • Hemolytic anemia due to glutathione synthetase deficiency MIM#231900
  • Disorders of the gamma-glutamyl cycle
Tags
Green Green List (high evidence)
HAAO
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Vertebral, cardiac, renal, and limb defects syndrome 1 MIM#617660
  • NAD deficiency
Tags
Green Green List (high evidence)
HGD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Alkaptonuria MIM#203500
  • Disorders of phenylalanine or tyrosine metabolism
Tags
Green Green List (high evidence)
HPD
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hawkinsinuria MIM#140350
  • Tyrosinemia, type III MIM#276710
  • Disorders of phenylalanine or tyrosine metabolism
Tags
Green Green List (high evidence)
HS2ST1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Neurofacioskeletal syndrome with or without renal agenesis, MIM#619194
  • Developmental delay and corpus callosum, skeletal, and renal abnormalities
  • disorder of glycosaminoglycan metabolism
Tags
Green Green List (high evidence)
HSD3B7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Bile acid synthesis defect, congenital, 1 MIM#607765
  • Disorders of bile acid biosynthesis
Tags
Green Green List (high evidence)
ITPA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Inosine triphosphatase deficiency MIM#613850
  • Developmental and epileptic encephalopathy 35 MIM#616647
  • Disorders of purine metabolism
Tags
Green Green List (high evidence)
KYNU
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hydroxykynureninuria MIM#236800
  • Vertebral, cardiac, renal, and limb defects syndrome 2 MIM#617661
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Green Green List (high evidence)
L2HGDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • L-2-hydroxyglutaric aciduria MIM#236792
  • organic acidurias
Tags
Green Green List (high evidence)
LARS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Infantile liver failure syndrome 1 MIM#615438
  • disorder of leucine metabolism
Tags
Green Green List (high evidence)
LBR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Greenberg skeletal dysplasia MIM#215140
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
LCT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Lactase deficiency, congenital MIM#223000
  • Other carbohydrate disorders
Tags
Green Green List (high evidence)
LDHD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • D-lactic aciduria with susceptibility to gout MIM#245450
Tags
Green Green List (high evidence)
MAT1A
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypermethioninemia, persistent, autosomal dominant, due to methionine adenosyltransferase I/III deficiency MIM#250850
  • Methionine adenosyltransferase deficiency, autosomal recessive MIM#250850
  • Disorders of the metabolism of sulphur amino acids
Tags
Green Green List (high evidence)
MCCC1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • 3-Methylcrotonyl-CoA carboxylase 1 deficiency MIM#210200
  • Organic acidurias
Tags
Green Green List (high evidence)
MCCC2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • 3-Methylcrotonyl-CoA carboxylase 2 deficiency MIM#210210
  • Organic acidurias
Tags
Green Green List (high evidence)
MCEE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Methylmalonyl-CoA epimerase deficiency MIM#251120
  • Organic acidurias
Tags
Green Green List (high evidence)
MOCS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Molybdenum cofactor deficiency A MIM#252150
  • Disorders of molybdenum cofactor metabolism
Tags
  • treatable
Green Green List (high evidence)
MOCS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Molybdenum cofactor deficiency B MIM#252160
  • Disorders of molybdenum cofactor metabolism
Tags
Green Green List (high evidence)
MSMO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Microcephaly, congenital cataract, and psoriasiform dermatitis MIM#616834
  • Disorders of the metabolism of sterols
  • MONDO:0014793
Tags
Green Green List (high evidence)
MTHFR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Homocystinuria due to MTHFR deficiency MIM#236250
  • Disorders of folate metabolism and transport
Tags
Green Green List (high evidence)
MTRR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Homocystinuria-megaloblastic anemia, cbl E type MIM#236270
  • Disorders of the metabolism of sulphur amino acids
Tags
Green Green List (high evidence)
MVK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Mevalonic aciduria MIM#610377
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
NSDHL
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • CHILD syndrome MIM#308050
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
NT5C3A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Anemia, hemolytic, due to UMPH1 deficiency MIM#266120
  • disorder of pyrimidine metabolism
Tags
Green Green List (high evidence)
OAT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Gyrate atrophy of choroid and retina with or without ornithinemia - MIM#258870
Tags
Green Green List (high evidence)
PAH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Phenylketonuria MIM#261600
  • Disorders of phenylalanine or tyrosine metabolism
Tags
  • treatable
Green Green List (high evidence)
PCK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Phosphoenolpyruvate carboxykinase deficiency, cytosolic MIM#261680
  • Disorders of gluconeogenesis
Tags
Green Green List (high evidence)
PDXK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Neuropathy, hereditary motor and sensory, type VIC, with optic atrophy MIM#618511
  • Disorders of pyridoxine metabolism
Tags
Green Green List (high evidence)
PEPD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Prolidase deficiency MIM#170100
  • disorders of peptide metabolism
Tags
Green Green List (high evidence)
PHGDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Neu-Laxova syndrome 1 256520
  • Phosphoglycerate dehydrogenase deficiency 601815
Tags
Green Green List (high evidence)
PNP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Immunodeficiency due to purine nucleoside phosphorylase deficiency, MIM# 613179
Tags
Green Green List (high evidence)
POR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis 201750
  • Disordered steroidogenesis due to cytochrome P450 oxidoreductase 613571
Tags
Green Green List (high evidence)
PREPL
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Myasthenic syndrome, congenital, 22 MIM#616224
  • hypotonia-cystinuria syndrome
  • Disorders of amino acid transport
Tags
  • SV/CNV
Green Green List (high evidence)
PRODH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hyperprolinemia, type I 239500
  • Proline oxidase deficiency
Tags
Green Green List (high evidence)
PRPS1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Arts syndrome 301835
  • Charcot-Marie-Tooth disease, X-linked recessive, 5 311070
  • Deafness, X-linked 1 304500
  • Gout, PRPS-related 300661
  • Phosphoribosylpyrophosphate synthetase superactivity 300661
Tags
Green Green List (high evidence)
PSAT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Phosphoserine aminotransferase deficiency MIM#610992
  • Neu-Laxova syndrome 2 MIM#616038
Tags
Green Green List (high evidence)
PSPH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Phosphoserine phosphatase deficiency MIM#614023
  • Disorders of serine, glycine or glycerate metabolism
Tags
Green Green List (high evidence)
PYCR1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cutis laxa, autosomal recessive, type IIB MIM#612940
  • Cutis laxa, autosomal recessive, type IIIB MIM#614438
  • Disorders of ornithine or proline metabolism
Tags
Green Green List (high evidence)
RBP4
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Microphthalmia, isolated, with coloboma 10, MIM# 616428
  • Retinal dystrophy, iris coloboma, and comedogenic acne syndrome, MIM# 615147
Tags
Green Green List (high evidence)
RPIA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Ribose 5-phosphate isomerase deficiency, MIM# 608611
  • Leukoencephalopathy
Tags
Green Green List (high evidence)
SAR1B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Chylomicron retention disease, MIM# 246700
Tags
Green Green List (high evidence)
SC5D
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Lathosterolosis, MIM# 607330
Tags
Green Green List (high evidence)
SI
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Sucrase-isomaltase deficiency, congenital, MIM# 222900
Tags
Green Green List (high evidence)
SLC10A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Familial hypercholanemia-2, MIM#619256
Tags
Green Green List (high evidence)
SLC16A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Monocarboxylate transporter 1 deficiency, MIM# 616095
Tags
Green Green List (high evidence)
SLC2A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • GLUT1 deficiency syndrome 1, infantile onset, severe, 606777
  • GLUT1 deficiency syndrome 2, childhood onset, 612126
  • Disorders of glucose transport
Tags
Green Green List (high evidence)
SLC30A10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hypermanganesemia with dystonia 1, MIM# 613280
Tags
Green Green List (high evidence)
SLC39A14
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hypermanganesemia with dystonia 2, MIM# 617013
Tags
Green Green List (high evidence)
SLC39A4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Acrodermatitis enteropathica MIM#201100
  • (Disorder of zinc metabolism)
Tags
Green Green List (high evidence)
SLC46A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Folate malabsorption, hereditary, MIM# 229050
Tags
Green Green List (high evidence)
SLC5A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Glucose/galactose malabsorption MIM# 606824
  • (Disorders of glucose transport)
Tags
Green Green List (high evidence)
SLC5A6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Neurodegeneration, infantile-onset, biotin-responsive, MIM# 618973
Tags
Green Green List (high evidence)
SLC6A19
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hartnup disorder, MIM# 234500
  • Hyperglycinuria, MIM# 138500
  • Iminoglycinuria, MIM# 242600
Tags
Green Green List (high evidence)
SLC6A8
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Cerebral creatine deficiency syndrome 1, MIM# 300352
Tags
Green Green List (high evidence)
SPTLC1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Neuropathy, hereditary sensory and autonomic, type IA, MIM# 162400
  • Serine palmitoyl transferase deficiency (Disorders of complex lipid synthesis)
Tags
Green Green List (high evidence)
SPTLC2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Neuropathy, hereditary sensory and autonomic, type IC, MIM# 613640
  • Serine palmitoyl transferase deficiency (Disorders of complex lipid synthesis)
Tags
Green Green List (high evidence)
STS
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Ichthyosis, X-linked 308100
  • Sterol metabolism disorder
Tags
  • SV/CNV
Green Green List (high evidence)
SUOX
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Sulfite oxidase deficiency, MIM# 272300
Tags
Green Green List (high evidence)
TALDO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Transaldolase deficiency , MIM#606003
Tags
Green Green List (high evidence)
TAT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Tyrosinemia, type II, MIM# 276600
Tags
  • treatable
Green Green List (high evidence)
TREX1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Aicardi-Goutieres syndrome 1, dominant and recessive, MIM# 225750
  • Disorder of nucleotide metabolism
Tags
Green Green List (high evidence)
TTPA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Ataxia with isolated vitamin E deficiency MIM#277460
  • disorders of vitamins and cofactors
Tags
Green Green List (high evidence)
UGT1A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Bilirubin UDP-glucuronosyltransferase 1 deficiency (Disorders of bile acid metabolism and transport)
  • Crigler-Najjar syndrome, type I 218800
  • Crigler-Najjar syndrome, type II 606785
Tags
Green Green List (high evidence)
UMPS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Orotic aciduria, MIM# 258900
Tags
Green Green List (high evidence)
UPB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Beta-ureidopropionase deficiency, MIM# 613161
Tags
Green Green List (high evidence)
WDR45
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Neurodegeneration with brain iron accumulation 5, MIM# 300894
Tags
Amber Amber List (moderate evidence)
AASS
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Hyperlysinemia, MIM# 238700
Tags
  • disputed
Amber Amber List (moderate evidence)
ACSF3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Disease associations
  • Combined malonic and methylmalonic aciduria MIM#614265
Tags
Amber Amber List (moderate evidence)
CD320
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Methylmalonic aciduria, transient, due to transcobalamin receptor defect MIM#613646
  • Disorders of cobalamin absorption, transport and metabolism
Tags
Amber Amber List (moderate evidence)
CTH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Disease associations
  • Cystathioninuria MIM#219500
Tags
Amber Amber List (moderate evidence)
DCXR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Disease associations
  • Pentosuria MIM#260800
  • Disorders of pentose metabolism
Tags
Amber Amber List (moderate evidence)
GGT1
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Glutathioninuria MIM#231950
  • Disorders of the gamma-glutamyl cycle
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
HAL
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Histidinemia MIM#235800
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Amber Amber List (moderate evidence)
KHK
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Fructosuria MIM#229800
  • Disorders of fructose metabolism
Tags
Amber Amber List (moderate evidence)
OPLAH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Disease associations
  • 5-oxoprolinase deficiency MIM#260005
  • Disorders of the gamma-glutamyl cycle
Tags
Amber Amber List (moderate evidence)
PFAS
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Inborn error of metabolism, MONDO:0019052, PFAS-related
Tags
Amber Amber List (moderate evidence)
SARDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Sarcosinemia MIM#268900
  • Disorders of serine, glycine or glycerate metabolism
Tags
Amber Amber List (moderate evidence)
SHPK
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Sedoheptulokinase deficiency MIM#617213
Tags
Amber Amber List (moderate evidence)
SLC1A1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Disease associations
  • Dicarboxylic aminoaciduria, MIM#222730
Tags
Amber Amber List (moderate evidence)
SLC36A2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Hyperglycinuria MIM#138500
  • Iminoglycinuria, digenic MIM#242600
  • Disorders of amino acid transport
Tags
Amber Amber List (moderate evidence)
SUGCT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Glutaric aciduria III MIM#231690
  • Organic acidurias
Tags
Amber Amber List (moderate evidence)
TXNIP
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Metabolic disease MONDO:0005066, TXNIP-related
Tags
Amber Amber List (moderate evidence)
UROC1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Disease associations
  • Urocanase deficiency, MIM#276880
Tags
Red Red List (low evidence)
DMGDH
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Dimethylglycine dehydrogenase deficiency MIM#605850
Tags
Red Red List (low evidence)
GCSH
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Glycine encephalopathy MIM#605899
  • Disorders of serine, glycine or glycerate metabolism
Tags
Red Red List (low evidence)
GLYAT
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Neurodevelopmental disorder, MONDO:0700092, GLYAT-related
Tags
Red Red List (low evidence)
HIBADH
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • organic aciduria
Tags
Red Red List (low evidence)
NAT8L
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • N-acetylaspartate deficiency - MIM#614063
Tags
Red Red List (low evidence)
PPA1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Galactosaemia, MONDO:0018116
Tags
Red Red List (low evidence)
SLC27A5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Bile acid-CoA ligase deficiency
  • Disorders of bile acid biosynthesis
Tags
Red Red List (low evidence)
TDO2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Hypertryptophanemia MIM#600627
  • Disorders of histidine, tryptophan or lysine metabolism
Tags

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