Description
This panel contains genes associated with skeletal dysplasias. 

It has been compared against the Genomics England PanelApp 'Skeletal dysplasia' panel V8.6, with all discrepancies reviewed and resolved (January 2026).

Depending on the specific clinical features present, consider applying the Osteogenesis Imperfecta, Osteoporosis and Osteopetrosis, and Hypophosphataemia or rickets panels.

39 reviewers

  • Kristin Rigbye (Victorian Clinical Genetics Services)

  • Belinda Chong (Victorian Clinical Genetics Services)

  • Sue White (Victorian Clinical Genetics Services)

  • Alison Yeung (Victorian Clinical Genetics Services)

  • Natalie Tan (Victorian Clinical Genetics Services)

  • Chris Richmond (Genetic Health Queensland)

  • Andrew Fennell (Monash Genetics)

  • Paul De Fazio (Victorian Clinical Genetics Services)

  • Eleanor Williams (Genomics England)

  • Samantha Ayres (Victorian Clinical Genetics Services)

  • Abhijit Kulkarni (Healius Pathology)

  • Arina Puzriakova (Genomics England)

  • Danielle Ariti (University of Melbourne)

  • Manny Jacobs (Victorian Clinical Genetics Services)

  • Sarah Leigh (Genomics England)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Suliman Khan (Victorian Clinical Genetics Services)

  • Sangavi Sivagnanasundram (Melbourne Health)

  • Michelle Torres (Victorian Clinical Genetics Services)

  • Achchuthan Shanmugasundram (Genomics England)

  • Teresa Zhao (Victorian Clinical Genetics Services)

  • Sarah Pantaleo (Victorian Clinical Genetics Services)

  • Melanie Marty (Victorian Clinical Genetics Services)

  • Paul De Fazio (Victorian Clinical Genetics Services)

  • Naomi Baker (Victorian Clinical Genetics Services)

  • Daniel Flanagan (Victorian Clinical Genetics Services)

  • Bryony Thompson (Royal Melbourne Hospital)

  • Seb Lunke (Victorian Clinical Genetics Services)

  • Chern Lim (Victorian Clinical Genetics Services)

  • Dean Phelan (Victorian Clinical Genetics Services)

  • Lucy Spencer (Victorian Clinical Genetics Services)

  • Elena Savva (Victorian Clinical Genetics Services)

  • Crystle Lee (Victorian Clinical Genetics Services)

  • Belinda Chong (Victorian Clinical Genetics Services)

  • Krithika Murali (Pathology Queensland)

  • Sarah Milton (Victorian Clinical Genetics Services)

  • Karina Sandoval (Victorian Clinical Genetics Services)

  • Zornitza Stark (Victorian Clinical Genetics Services)

  • chirag patel (Genetic Health Queensland)

656 Entities

632 reviewed, 486 green

List Entity Reviews Mode of inheritance Details
656 Entitiess
Green Green List (high evidence)
ABCC9
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Hypertrichotic osteochondrodysplasia 23985 (Cantu syndrome)
  • Hypertrichotic osteochondrodysplasia 239850
Tags
Green Green List (high evidence)
ABL1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Congenital heart defects and skeletal malformations syndrome, 617602
Tags
Green Green List (high evidence)
ACAN
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Spondyloepiphyseal dysplasia, Kimberley type 608361
  • Osteochondritis dissecans, short stature, and early-onset osteoarthritis 165800
  • Spondyloepimetaphyseal dysplasia, aggrecan type 61283
Tags
Green Green List (high evidence)
ACP5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondyloenchondrodysplasia with immune dysregulation MIM#607944
Tags
Green Green List (high evidence)
ACVR1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Fibrodysplasia ossificans progressiva 135100
Tags
  • clinical trial
Green Green List (high evidence)
ADAMTS10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Weill-Marchesani syndrome 1, recessive, 277600
Tags
Green Green List (high evidence)
ADAMTS17
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Weill-Marchesani syndrome type 4 MIM# 613195
Tags
Green Green List (high evidence)
ADAMTSL2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Geleophysic dysplasia 1 MIM#231050
  • Lethal short-limb skeletal dysplasia Al-Gazali type (OMIM %601356)
Tags
Green Green List (high evidence)
AFF3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
Disease associations
  • KINSSHIP syndrome, MIM# 619297
Tags
Green Green List (high evidence)
AFF4
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • CHOPS syndrome MIM#616368
Tags
Green Green List (high evidence)
AGA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Aspartylglucosaminuria, MIM# 208400
  • MONDO:0008830
Tags
Green Green List (high evidence)
AGPS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Foundation Trust) Rhizomelic chondrodysplasia punctata, type 3 600121
  • Rhizomelic chondrodysplasia punctata, type 3 600121
Tags
Green Green List (high evidence)
AIFM1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Disease associations
  • spondyloepimetaphyseal dysplasia, Bieganski type, MONDO:0010275
  • Spondyloepimetaphyseal dysplasia, X-linked, with hypomyelinating leukodystrophy, MIM# 300232
Tags
Green Green List (high evidence)
ALG12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type Ig 607143
Tags
Green Green List (high evidence)
ALG3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type Id 601110
Tags
Green Green List (high evidence)
ALG9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Gillessen-Kaesbach-Nishimura syndrome 263210
  • Congenital disorder of glycosylation, type Il 608776
  • Gillessen-Kaesbach-Nishimura syndrome 263210
Tags
Green Green List (high evidence)
ALPL
3 reviews
3 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypophosphatasia, adult 146300 (AD, AR)
  • Hypophosphatasia, childhood 241510 AR
  • Hypophosphatasia, infantile 241500 AR
  • Odontohypophosphatasia 146300 AD, AR
Tags
  • treatable
Green Green List (high evidence)
ALX1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Frontonasal dysplasia 3 613456
  • Frontonasal dysplasia type 3 613456
Tags
Green Green List (high evidence)
ALX3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Frontonasal dysplasia 1 136760
  • Frontonasal dysplasia 1 136760 (frontorhiny)
Tags
Green Green List (high evidence)
ALX4
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Frontonasal dysplasia 2 613451
Tags
Green Green List (high evidence)
AMER1
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopathia striata with cranial sclerosis, MIM# 300373
Tags
Green Green List (high evidence)
ANKH
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Chondrocalcinosis 2 118600
  • Craniometaphyseal dysplasia 123000
Tags
Green Green List (high evidence)
ANKRD11
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • KBG syndrome 148050
Tags
Green Green List (high evidence)
ANO5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
Disease associations
  • Disproportionate Short Stature
  • Osteogenesis Imperfecta and Decreased Bone Density
  • Gnatodiaphyseal dysplasia
  • skeletal dysplasias
Tags
Green Green List (high evidence)
ANTXR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Hyaline fibromatosis syndrome 228600
Tags
Green Green List (high evidence)
ARCN1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay (MIM#617164)
Tags
Green Green List (high evidence)
ARHGAP31
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Genetic Health Queensland
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Adams-Oliver syndrome 1 100300
Tags
Green Green List (high evidence)
ARID1A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
Disease associations
  • Coffin-Siris
Tags
Green Green List (high evidence)
ARID1B
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Coffin-Siris syndrome type 1 - 135900
  • Coffin-Siris
Tags
Green Green List (high evidence)
ARL6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet-Biedl syndrome 3 600151
Tags
Green Green List (high evidence)
ARSB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis type VI (Maroteaux-Lamy), MIM# 253200
  • MONDO:0009661
Tags
  • clinical trial
  • treatable
Green Green List (high evidence)
ARSK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Mucopolysaccharidosis MONDO:0019249, ARSK-related
Tags
Green Green List (high evidence)
ARSL
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • CHONDRODYSPLASIA PUNCTATA 1, X-LINKED
  • X-linked recessive chondrodysplasia punctata
  • Chondrodysplasia punctata, X-linked recessive, 302950
  • CDPXL
Tags
Green Green List (high evidence)
ASXL1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Bohring-Opitz syndrome 605039
Tags
Green Green List (high evidence)
ASXL2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Shashi-Pena syndrome 617190
  • Shashi-Pena syndrome 617190
Tags
Green Green List (high evidence)
ATP6V0A2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cutis laxa, autosomal recessive, type IIA 219200
  • Cutis laxa, autosomal recessive, type IIA 219200
Tags
Green Green List (high evidence)
ATP7A
3 reviews
3 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Spinal muscular atrophy, distal, 300489
  • Menkes disease 309400
  • Occipital horn syndrome 304150
Tags
Green Green List (high evidence)
ATR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Seckel syndrome 1, MIM# 210600
Tags
Green Green List (high evidence)
AXIN1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Craniometadiaphyseal osteosclerosis with hip dysplasia, MIM# 620558
Tags
Green Green List (high evidence)
B3GALT6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Ehlers-Danlos syndrome, progeroid type, 2 615349
  • Spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures 271640
Tags
Green Green List (high evidence)
B3GAT3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Larsen alike phenotype (skd incl)
  • Multiple joint dislocations, short stature, craniofacial dysmorphism, and congenital heart defects, 245600
Tags
Green Green List (high evidence)
B3GLCT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Peters-plus syndrome 261540
  • O-fucose-specific beta-1,3-N-glucosyltransferase deficiency (Disorders of protein O-glycosylation, O-mannosylglycan synthesis deficiencies)
Tags
Green Green List (high evidence)
B4GALT7
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ehlers-Danlos syndrome with short stature and limb anomalies 130070
Tags
Green Green List (high evidence)
B9D1
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ciliopathy, MONDO:0005308, B9D1-related
Tags
Green Green List (high evidence)
BBS1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet-Biedl syndrome 1 209900
Tags
Green Green List (high evidence)
BBS10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet Biedl syndrome 10, 615987
  • Polydactyly
Tags
Green Green List (high evidence)
BBS12
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet Biedl syndrome 12, 615989
  • Polydactyly
Tags
Green Green List (high evidence)
BBS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet-Biedl syndrome 2, 615981
Tags
Green Green List (high evidence)
BBS4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 4, 615982
  • Polydactyly
Tags
Green Green List (high evidence)
BBS5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet Biedl syndrome 5, 615983
Tags
Green Green List (high evidence)
BBS7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 7, 615984
  • Polydactyly
Tags
Green Green List (high evidence)
BBS9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet Biedl syndrome 9, 615986
Tags
Green Green List (high evidence)
BGN
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
  • Literature
Disease associations
  • Spondyloepimetaphyseal dysplasia, X-linked - MIM# 300106
Tags
Green Green List (high evidence)
BHLHA9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Syndactyly, mesoaxial synostotic, with phalangeal reduction 609432
Tags
Green Green List (high evidence)
BMP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type XIII, 614856
Tags
Green Green List (high evidence)
BMP2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • {HFE hemochromatosis, modifier of} 235200
  • short stature, facial dysmorphism and skeletal anomalies with or without cardiac aomalies 617877.
  • Brachydactyly, type A2 112600
Tags
Green Green List (high evidence)
BMPER
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Diaphanospondylodysostosis 608022
Tags
Green Green List (high evidence)
BMPR1B
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Brachydactyly, type A1, D 616849
  • Acromesomelic dysplasia, Demirhan type 609441
  • Brachydactyly, type A2 112600
Tags
Green Green List (high evidence)
BPNT2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Chondrodysplasia with joint dislocations, GPAPP type 614078
Tags
Green Green List (high evidence)
C2CD3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Orofaciodigital syndrome XIV 615948
Tags
Green Green List (high evidence)
CA2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopetrosis, autosomal recessive 3, with renal tubular acidosis 259730
Tags
Green Green List (high evidence)
CANT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • multiple epiphyseal dysplasia type 7, 617719.
  • Desbuquois dysplasia 1 251450
Tags
Green Green List (high evidence)
CASR
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypocalcemia, autosomal dominant, with Bartter syndrome 601198
  • Hypocalcemia, autosomal dominant 601198
  • Hyperparathyroidism, neonatal 239200
  • Hypocalciuric hypercalcemia, type I 145980
Tags
Green Green List (high evidence)
CBFB
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • cleidocranial dysplasia (MONDO#0007340), CBFB-related
Tags
Green Green List (high evidence)
CC2D2A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 6 612284
Tags
Green Green List (high evidence)
CCDC134
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Osteogenesis imperfecta, type XXII, MIM#619795
Tags
Green Green List (high evidence)
CCDC8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • 3-M syndrome 3, 614205
Tags
Green Green List (high evidence)
CCN6
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Arthropathy, progressive pseudorheumatoid, of childhood 208230
  • Spondyloepiphyseal dysplasia tarda with progressive arthropathy 208230
Tags
  • new gene name
Green Green List (high evidence)
CCNQ
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • STAR syndrome 300707
  • STAR syndrome 300707
Tags
Green Green List (high evidence)
CDC45
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Disease associations
  • Craniosynostosis (Wilkie) (from Ana Beleza)
  • Meier-Gorlin syndrome with craniosynostosis (from PMID 27374770)
Tags
Green Green List (high evidence)
CDH3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ectodermal dysplasia, ectrodactyly, and macular dystrophy 225280
Tags
Green Green List (high evidence)
CDKN1C
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • IMAGE syndrome 614732
Tags
Green Green List (high evidence)
CDT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meier-Gorlin syndrome 4 613804
Tags
Green Green List (high evidence)
CEP120
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Joubert syndrome 213300
  • Short-rib thoracic dysplasia 13 with or without polydactyly 616300
Tags
Green Green List (high evidence)
CEP290
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 14 615991
  • Leber congenital amaurosis 10
  • Joubert syndrome 5 610188
  • Meckel syndrome 4 611134
  • Senior-Loken syndrome 6 610189
Tags
Green Green List (high evidence)
CEP295
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Seckel syndrome 11, OMIM # 620767
Tags
Green Green List (high evidence)
CFAP410
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Axial Spondylometaphyseal Dysplasia 602271
  • Spondylometaphyseal dysplasia, axial 602271
Tags
Green Green List (high evidence)
CHST14
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Ehlers-Danlos syndrome, musculocontractural type 1 601776
Tags
Green Green List (high evidence)
CHST3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Spondyloepiphyseal dysplasia with congenital joint dislocations (recessive Larsen syndrome) 143095
Tags
Green Green List (high evidence)
CHSY1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Temtamy preaxial brachydactyly syndrome 605282
Tags
Green Green List (high evidence)
CILK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Endocrine-cerebroosteodysplasia 612651
Tags
Green Green List (high evidence)
CLCN5
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Nephrolithiasis, type I 310468
  • Dent disease 300009
  • Hypophosphatemic rickets 300554
  • Proteinuria, low molecular weight, with hypercalciuric nephrocalcinosis 308990
Tags
Green Green List (high evidence)
CLCN7
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopetrosis, autosomal recessive 4 611490
  • Osteopetrosis, autosomal dominant 2 166600
Tags
  • treatable
Green Green List (high evidence)
COG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type IIg 611209
Tags
Green Green List (high evidence)
COG4
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Victorian Clinical Genetics Services
Disease associations
  • Saul-Wilson syndrome, OMIM #618150
Tags
Green Green List (high evidence)
COL10A1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Metaphyseal chondrodysplasia, Schmid type 156500
Tags
Green Green List (high evidence)
COL11A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Stickler syndrome, type II 604841
  • Fibrochondrogenesis 1 228520
  • Marshall syndrome 154780
Tags
Green Green List (high evidence)
COL11A2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Fibrochondrogenesis 2 614524?
  • Otospondylomegaepiphyseal dysplasia 215150
  • Fibrochondrogenesis 2 614524
  • Weissenbacher-Zweymuller syndrome 277610
  • Stickler syndrome, type III 184840
Tags
Green Green List (high evidence)
COL1A1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Ehlers-Danlos syndrome, type VIIA 130060
  • Osteogenesis imperfecta, type III 259420
  • Osteogenesis imperfecta, type I 166200
  • Osteogenesis imperfecta, type IV 166220
  • Ehlers-Danlos syndrome, classic 130000
  • Caffey disease 114000
  • Osteogenesis imperfecta, type II 166210
Tags
Green Green List (high evidence)
COL1A2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Osteogenesis imperfecta, type III 259420
  • Osteogenesis imperfecta, type IV 166220
  • Ehlers-Danlos syndrome, type VIIB 130060
  • Ehlers-Danlos syndrome, cardiac valvular form 225320
  • Osteogenesis imperfecta, type II 166210
Tags
Green Green List (high evidence)
COL27A1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Victorian Clinical Genetics Services
Disease associations
  • OMIM #615155 Steel Syndrome
Tags
Green Green List (high evidence)
COL2A1
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Osteoarthritis with mild chondrodysplasia 604864
  • Czech dysplasia 609162
  • SMED Strudwick type 184250
  • Spondyloepiphyseal dysplasia, Stanescu type 616583
  • Epiphyseal dysplasia, multiple, with myopia and deafness 132450
  • SED congenita 183900
  • Otospondylomegaepiphyseal dysplasia 215150
  • Stickler syndrome, type I 108300
  • Stickler sydrome, type I, nonsyndromic ocular 609508
  • Kniest dysplasia 156550
  • Platyspondylic skeletal dysplasia, Torrance type 151210
  • Spondyloperipheral dysplasia 271700
  • Achondrogenesis, type II or hypochondrogenesis 200610
  • Legg-Calve-Perthes disease 150600
  • Avascular necrosis of the femoral head 608805
Tags
Green Green List (high evidence)
COL9A1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Stickler syndrome, type IV 614134
  • Epiphyseal dysplasia, multiple, 6 614135
Tags
Green Green List (high evidence)
COL9A2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Stickler syndrome, type V, 614284
  • Epiphyseal dysplasia, multiple, 2 600204
  • Stickler syndrome, type V 614284
  • {Intervertebral disc disease, susceptibility to}, 603932
Tags
Green Green List (high evidence)
COL9A3
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • MED
  • Mutiple Epiphyseal Dysplasia
  • Multiple Epiphyseal Dysplasia, Dominant
  • Epiphyseal dysplasia, multiple, with myopathy
  • Stickler syndrome type VI
  • multiple epiphyseal dysplasia
  • multiple epiphyseal dysplasia 3, with or without myopathy - 600969
Tags
Green Green List (high evidence)
COLEC11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • 3MC syndrome 2 265050
Tags
Green Green List (high evidence)
COMP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
Disease associations
  • Epiphyseal dysplasia, multiple, 1 132400
  • Pseudoachondroplasia 177170
Tags
Green Green List (high evidence)
COMP_MEDPSACH_GAC
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Epiphyseal dysplasia, multiple, 1 MIM#132400
  • Pseudoachondroplasia MIM#177170
Tags
  • paediatric-onset
Green Green List (high evidence)
CREB3L1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Osteogenesis imperfecta, type XVI 616229
Tags
Green Green List (high evidence)
CREBBP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Rubinstein-Taybi syndrome 180849
  • Rubinstein-Taybi syndrome 180849
Tags
Green Green List (high evidence)
CRIPT
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature with microcephaly and distinctive facies (MIM#615789)
  • Rothmund-Thomson syndrome MONDO:0010002
Tags
Green Green List (high evidence)
CRTAP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Osteogenesis imperfecta, type VII 610682
Tags
Green Green List (high evidence)
CSF1R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Brain abnormalities, neurodegeneration, and dysosteosclerosis, MIM# 618476
  • BANDDOS
Tags
Green Green List (high evidence)
CSGALNACT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Skeletal dysplasia, mild, with joint laxity and advanced bone age, MIM# 618870
Tags
Green Green List (high evidence)
CSPP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • ORPHA:475 Joubert syndrome
  • Joubert syndrome 21 615636
  • ORPHA:397715 Joubert syndrome with Jeune asphyxiating thoracic dystrophy
  • Joubert syndrome 21 615636
  • ORPHA:564 Meckel syndrome
Tags
Green Green List (high evidence)
CTSA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Galactosialidosis 256540
Tags
Green Green List (high evidence)
CTSC
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Haim-Munk syndrome 245010,
  • Haim-Munk syndrome 245010
Tags
Green Green List (high evidence)
CTSK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Pycnodysostosis 265800
Tags
Green Green List (high evidence)
CUL7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • 3-M syndrome 1, MIM# 273750
  • Yakut short stature syndrome
Tags
Green Green List (high evidence)
CWC27
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Retinitis pigmentosa with or without skeletal anomalies, MIM# 250410
Tags
Green Green List (high evidence)
CYP26B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Craniosynostosis with radiohumeral fusions and other skeletal and craniofacial anomalies, MIM# 614416
Tags
Green Green List (high evidence)
CYP27B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Vitamin D-dependent rickets, type I 264700
Tags
Green Green List (high evidence)
CYP2R1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Disease associations
  • Rickets due to defect in vitamin D 25-hydroxylation, 600081
Tags
Green Green List (high evidence)
DCC
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Gaze palsy, familial horizontal, with progressive scoliosis, 2, MIM# 617542
Tags
Green Green List (high evidence)
DDR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • ClinGen
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondyloepimetaphyseal dysplasia-short limb-abnormal calcification syndrome, MONDO:0010077
Tags
Green Green List (high evidence)
DDRGK1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Spondyloepimetaphyseal dysplasia, Shohat type, OMIM:602557
Tags
  • founder
Green Green List (high evidence)
DHCR24
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Desmosterolosis, MONDO:0011217
Tags
Green Green List (high evidence)
DHCR7
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Smith-Lemli-Opitz syndrome 270400
Tags
Green Green List (high evidence)
DHODH
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Miller syndrome (postaxial acrofacial dysostosis) 263750
Tags
Green Green List (high evidence)
DIS3L2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Perlman syndrome 267000
Tags
Green Green List (high evidence)
DLL3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Spondylocostal dysostosis 1, autosomal recessive 277300
Tags
Green Green List (high evidence)
DLL4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Adams-Oliver syndrome 6, 616589
Tags
Green Green List (high evidence)
DLX3
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Tricho-dento-osseous syndrome, MONDO:0008592
Tags
Green Green List (high evidence)
DLX5
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Disease associations
  • Split-hand/foot malformation 1 with sensorineural hearing loss 220600
Tags
Green Green List (high evidence)
DMP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Acromesomelic dysplasia, Hunter-Thompson type, 201250
  • Symphalangism, proximal, 1B, 615298
  • Hypophosphatemic rickets,autosomal recessive,type 1 (ARHR1)
  • Brachydactyly, type A1, C, 615072
  • Brachydactyly, type A2, 112600
  • Du Pan syndrome, 228900
  • Hypophosphatemic rickets, AR, 241520
  • Osteogenesis Imperfecta and Decreased Bone Density
  • Chondrodysplasia, Grebe type, 200700
  • skeletal dysplasias
  • Brachydactyly, type C, 113100
  • {Osteoarthritis-5}, 612400
  • Multiple synostoses syndrome 2, 610017
Tags
Green Green List (high evidence)
DMRT2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Spondylocostal dysostosis 7, autosomal recessive, MIM# 621523
Tags
Green Green List (high evidence)
DNA2
2 reviews
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Rothmund-Thomson syndrome, type 4, MIM# 620819
  • Seckel syndrome 8, MIM#615807
  • Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 6 MIM#615156
Tags
Green Green List (high evidence)
DNAJC21
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • 617052 BONE MARROW FAILURE SYNDROME 3
  • BMFS3
Tags
Green Green List (high evidence)
DNMT3A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Disease associations
  • Heyn-Sproul-Jackson syndrome, MIM# 618724
Tags
Green Green List (high evidence)
DOCK6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Adams-Oliver syndrome 2 614219
  • Adams-Oliver syndrome 2 614219
Tags
Green Green List (high evidence)
DONSON
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Microcephaly, short stature, and limb abnormalities, MIM# 617604
  • Microcephaly-micromelia syndrome, MIM# 251230
  • Meier-Gorlin syndrome 10, MIM# 621528
Tags
Green Green List (high evidence)
DPAGT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Myasthenic syndrome, congenital, 13, with tubular aggregates 614750
  • UDP-GlcNAc:Dol-P-GlcNac-P transferase deficiency (Disorders of protein N-glycosylation)
  • Congenital disorder of glycosylation, type Ij 608093
Tags
Green Green List (high evidence)
DPM1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Congenital disorder of glycosylation, type Ie 608799
Tags
Green Green List (high evidence)
DVL1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Robinow syndrome, autosomal dominant 2, MIM# 616331
Tags
Green Green List (high evidence)
DVL3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow syndrome, autosomal dominant 3, 616894
Tags
Green Green List (high evidence)
DYM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Smith-McCort dysplasia 607326
  • Dyggve-Melchior-Clausen disease 223800
Tags
Green Green List (high evidence)
DYNC2H1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short rib polydactyly syndrome (SRPS) type 3 with or without polydactyly, 613091
  • Asphyxiating thoracic dystrophy 3, 613091Short rib-polydactyly syndrome, type III, 263510Short rib-polydactyly syndrome, type IIB, 615087
  • Short rib polydactyly syndrome (SRPS) type 1/3 (Saldino-Noonan/Verma-Naumoff)
Tags
Green Green List (high evidence)
DYNC2I1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 8 with or without polydactyly 615503
Tags
Green Green List (high evidence)
DYNC2I2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 11 with or without polydactyly, 615633
Tags
Green Green List (high evidence)
DYNC2LI1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • SRTD15 #617088
  • SHORT-RIB THORACIC DYSPLASIA 15 WITH POLYDACTYLY
Tags
Green Green List (high evidence)
DYNLT2B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 17 with or without polydactyly, 617405
Tags
Green Green List (high evidence)
EBP
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • MEND syndrome
  • CDPXLD
  • MEND syndrome-300960 XLR.
  • X-linked dominant chondrodysplasia punctata
  • Chondrodysplasia punctata, X-linked dominant, 302960
Tags
Green Green List (high evidence)
EED
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cohen-Gibson syndrome 617561
  • Cohen-Gibson syndrome 617561
Tags
Green Green List (high evidence)
EFL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • 617941 SHWACHMAN-DIAMOND SYNDROME 2
  • SDS2
Tags
Green Green List (high evidence)
EFTUD2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mandibulofacial dysostosis, Guion-Almeida type 610536
Tags
Green Green List (high evidence)
EIF2AK3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Wolcott-Rallison syndrome 226980
  • Wolcott-Rallison syndrome 226980
Tags
Green Green List (high evidence)
EN1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • ENDOVE syndrome, limb-only type, MIM# 619217
  • ENDOVE syndrome, limb-brain type, MIM# 619218
Tags
  • 5'UTR
  • SV/CNV
Green Green List (high evidence)
ENPP1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Cole disease 615522
  • Arterial calcification, generalized, of infancy, 1 208000
  • Hypophosphatemic rickets, autosomal recessive, 2 613312
Tags
Green Green List (high evidence)
EOGT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Adams Oliver syndrome 4
Tags
Green Green List (high evidence)
ERF
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Craniosynostosis 4 600775
  • Chitayat syndrome - 617180
Tags
Green Green List (high evidence)
ERI1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Spondyloepimetaphyseal dysplasia, Guo-Salian type, MIM# 620663
Tags
Green Green List (high evidence)
ESCO2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • SC phocomelia syndrome 269000
  • Roberts syndrome 268300
Tags
Green Green List (high evidence)
EVC
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ellis-van Creveld syndrome, 225500
  • ECV1
  • Ellis-van Creveld Syndrome
  • Ellis-van Creveld syndrome, 225500Weyers acrodental dysostosis, 193530
Tags
Green Green List (high evidence)
EVC2
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ellis-van Creveld syndrome 225500
  • Weyers acrofacial dysostosis 193530
Tags
Green Green List (high evidence)
EXOC6B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Spondyloepimetaphyseal dysplasia with joint laxity MONDO:0019675
Tags
Green Green List (high evidence)
EXT1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • trichorhinophalangeal syndrome type 2 -150230
  • Exostoses, multiple, type 13370
  • Exostoses, multiple, type 1 133700
Tags
Green Green List (high evidence)
EXT2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Exostoses, multiple, type 2 133701
Tags
Green Green List (high evidence)
EXTL3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Immunoskeletal dysplasia with neurodevelopmental abnormalities 617425
  • Immunoskeletal dysplasia with neurodevelopmental abnormalities 617425
Tags
Green Green List (high evidence)
EZH2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Weaver syndrome
Tags
Green Green List (high evidence)
FAM111A
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Gracile bone dysplasia 602361
  • Kenny-Caffey syndrome, type 2 127000
Tags
Green Green List (high evidence)
FAM20B
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Desbuquois dysplasia MONDO:0015426
Tags
Green Green List (high evidence)
FAM20C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Raine syndrome 259775
Tags
Green Green List (high evidence)
FBN1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Stiff skin syndrome 184900
  • Marfan syndrome 154700
  • Geleophysic dysplasia 2 614185
  • Weill-Marchesani syndrome 2, dominant 608328
  • Acromicric dysplasia 102370
Tags
Green Green List (high evidence)
FBN2
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Contractural arachnodactyly, congenital 121050
Tags
Green Green List (high evidence)
FERMT3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • (Moderate osteopetrosis) Kilic SS et al. The clinical spectrum of leukocyte adhesion deficiency (LAD) III due to defective CalDAG-GEF1. J Clin Immunol. 2009 Jan, 29(1):117-22.
  • Leukocyte adhesion deficiency, type III 612840
Tags
Green Green List (high evidence)
FGF10
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • LADD syndrome 149730
Tags
Green Green List (high evidence)
FGF16
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Metacarpal 4-5 fusion 309630
  • Metacarpal 4-5 fusion 309630
Tags
Green Green List (high evidence)
FGF23
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Osteomalacia, tumor-induced
  • Tumoral calcinosis, hyperphosphatemic, familial 211900
  • Hypophosphatemic rickets, autosomal dominant 193100
Tags
Green Green List (high evidence)
FGF9
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Multiple synostoses syndrome type 3 612961
Tags
Green Green List (high evidence)
FGFR1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Hypogonadotropic hypogonadism 2 with or without anosmia 147950
  • Hartsfield syndrome 615465
  • Osteoglophonic dysplasia 166250
  • Pfeiffer syndrome 101600
  • Encephalocraniocutaneous lipomatosis, somatic mosaism 613001
  • Jackson-Weiss syndrome 123150
  • Trigonocephaly 1 190440
Tags
Green Green List (high evidence)
FGFR2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Craniosynostosis, nonspecific Crouzon syndrome 123500
  • Pfeiffer syndrome 101600
  • Beare-Stevenson cutis gyrata syndrome 123790
  • Apert syndrome 101200
  • Gastric cancer, somatic 613659
  • Craniofacial-skeletal-dermatologic dysplasia 101600
  • Antley-Bixler syndrome without genital anomalies or disordered steroidogenesis 207410
  • Bent bone dysplasia syndrome 614592
  • Jackson-Weiss syndrome 123150
  • LADD syndrome 149730
Tags
Green Green List (high evidence)
FGFR3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Crouzon syndrome with acanthosis nigricans 612247
  • Thanatophoric dysplasia, type II 187601
  • Thanatophoric dysplasia, type I 187600
  • SADDAN 616482
  • LADD syndrome 149730
  • Achondroplasia 100800
  • Hypochondroplasia 146000
  • Muenke syndrome 602849
  • CATSHL syndrome 610474
Tags
Green Green List (high evidence)
FIG4
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Yunis-Varon syndrome 216340
  • Yunis-Varon syndrome 216340
  • Amyotrophic lateral sclerosis 11 612577
Tags
Green Green List (high evidence)
FKBP10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type XI, 610968
  • Brucks syndrome 1 - 259450
  • Osteogenesis Imperfecta and Decreased Bone Density
  • skeletal dysplasias
  • Osteogenesis Imperfecta, Recessive
  • Brucks syndrome
Tags
Green Green List (high evidence)
FLNA
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Frontometaphyseal dysplasia 305620
  • Otopalatodigital syndrome, type II -304120
  • Osteodysplasty Melnick Needles 309350 XLD
  • Melnick Needles syndrome 309350
  • Otopalatodigital syndrome, type II 304120 XLD
  • Frontometaphyseal dysplasia 305620 XLR
  • Terminal osseous dysplasia 300244
  • Otopalatodigital syndrome, type I -311300
Tags
Green Green List (high evidence)
FLNB
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Atelosteogenesis, type I 108720
  • Spondylocarpotarsal synostosis syndrome 272460
  • Larsen syndrome 150250
  • Boomerang dysplasia 112310
  • Atelosteogenesis, type III 108721
Tags
Green Green List (high evidence)
FN1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondylometaphyseal dysplasia, corner fracture type 184255
Tags
Green Green List (high evidence)
FUCA1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Fucosidosis 230000
Tags
Green Green List (high evidence)
FUZ
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Ciliopathy_MONDO_0005308, FUZ-related
  • skeletal ciliopathy
Tags
Green Green List (high evidence)
FZD2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Autosomal dominant omodysplasia type 2 164745
  • Autosomal dominant omodysplasia 164745
Tags
Green Green List (high evidence)
GALNS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis IVA, MIM# 253000
  • MONDO:0009659
Tags
  • treatable
Green Green List (high evidence)
GALNT3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Tumoral calcinosis, hyperphosphatemic, familial I 211900
  • Familial hyperphosphatemic tumoral calcinosis/Hyperphosphatemic hyperostosis syndrome 211900
Tags
Green Green List (high evidence)
GDF5
3 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Chondrodysplasia, Grebe type 200700
  • Multiple synostoses syndrome 2 610017
  • Du Pan syndrome 228900
  • Acromesomelic dysplasia, Hunter-Thompson type 201250
  • Brachydactyly, type C 113100
  • Brachydactyly, type A1, C 615072
  • Symphalangism, proximal, 1B 615298
  • {Osteoarthritis-5} 612400
  • Brachydactyly, type A2 112600
Tags
Green Green List (high evidence)
GDF6
3 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Klippel-Feil syndrome 1, autosomal dominant 118100
  • Multiple synostoses syndrome type 4 - 617898.
Tags
Green Green List (high evidence)
GHR
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • increased responsiveness to growth hormone 604271
  • {Hypercholesterolemia, familial, modification of}, 143890
  • Short stature, 604271
  • Proportionate Short Stature/Small for Gestational Age
  • Growth hormone insensitivity
  • Increased responsiveness to growth hormone
  • Laron dwarfism, 262500
Tags
Green Green List (high evidence)
GHRHR
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Disease associations
  • isolated growth hormone deficiency type IB MONDO:0013006
Tags
Green Green List (high evidence)
GINS3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Meier-Gorlin syndrome 9, MIM# 621512
Tags
Green Green List (high evidence)
GJA1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Oculodentodigital dysplasia 164200
  • Erythrokeratodermia variabilis et progressiva 133200
  • Palmoplantar keratoderma with congenital alopecia 104100
  • Hypoplastic left heart syndrome 1 241550
  • Oculodentodigital dysplasia, autosomal recessive 257850
  • Craniometaphyseal dysplasia, autosomal recessive 218400
  • Syndactyly, type III 186100
Tags
Green Green List (high evidence)
GLB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • GM1-gangliosidosis, type II 230600
  • GM1-gangliosidosis, type III 230650
  • Mucopolysaccharidosis type IVB (Morquio) 253010
  • GM1-gangliosidosis, type I 230500
Tags
Green Green List (high evidence)
GLI3
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • {Hypothalamic hamartomas, somatic} 241800
  • Polydactyly, postaxial, types A1 and B 174200
  • Greig cephalopolysyndactyly syndrome 175700
  • Pallister-Hall syndrome 146510
  • Polydactyly, preaxial, type IV 174700
Tags
Green Green List (high evidence)
GNAS
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Pseudohypoparathyroidism Ia 103580
  • ACTH-independent macronodular adrenal hyperplasia 219080 IC
  • Pseudohypoparathyroidism Ib 603233
  • Pseudopseudohypoparathyroidism 612463
  • McCune-Albright syndrome, somatic, mosaic 174800
  • Pseudohypoparathyroidism Ic 612462
  • Osseous heteroplasia, progressive 166350
Tags
Green Green List (high evidence)
GNPAT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • RCDP2
  • Rhizomelic Chondrodysplasia Punctata
  • Rhizomelic chondrodysplasia punctata type 2
  • Chondrodysplasia punctata, rhizomelic, type 2, 222765
Tags
Green Green List (high evidence)
GNPNAT1
4 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Literature
Disease associations
  • Rhizomelic dysplasia, Ain-Naz type, MIM#619598
Tags
Green Green List (high evidence)
GNPTAB
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • GNPTAB-mucolipidosis MONDO:0100122
  • Mucolipidosis II alpha/beta, MIM# 252500
  • Mucolipidosis III alpha/beta, MIM# 252600
Tags
Green Green List (high evidence)
GNPTG
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucolipidosis III gamma 252605
Tags
Green Green List (high evidence)
GNS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis type IIID 252940
Tags
Green Green List (high evidence)
GORAB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Geroderma osteodysplasticum 231070
Tags
Green Green List (high evidence)
GPC6
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Omodysplasia 1 MIM#258315
Tags
  • SV/CNV
Green Green List (high evidence)
GPX4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Spondylometaphyseal dysplasia, Sedaghatian type MIM#250220
Tags
Green Green List (high evidence)
GSC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Short stature, auditory canal atresia, mandibular hypoplasia, skeletal abnormalities, MIM# 602471
Tags
Green Green List (high evidence)
GUSB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis VII 253220
Tags
Green Green List (high evidence)
GZF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Joint laxity, short stature, and myopia, MIM# 617662
  • Larsen-like syndrome
Tags
Green Green List (high evidence)
HDAC8
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Cornelia de Lange syndrome 5 300882
  • Wilson-Turner syndrome 309585
Tags
Green Green List (high evidence)
HES7
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondylocostal dysostosis 4, autosomal recessive 613686
Tags
Green Green List (high evidence)
HGSNAT
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis type IIIC (Sanfilippo C) 252930
Tags
Green Green List (high evidence)
HHAT
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Nivelon-Nivelon-Mabille syndrome 600092
Tags
Green Green List (high evidence)
HOXA13
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Guttmacher syndrome 176305
  • Hand-foot-uterus syndrome 140000
  • Hand-foot-genital syndrome 140000
Tags
Green Green List (high evidence)
HOXA13_HFGS_GCN3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HOXD13
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Brachydactyly, type E 113300
  • Brachydactyly, type D 113200
  • Syndactyly, type V 186300
  • Synpolydactyly 1 186000
  • Brachydactyly-syndactyly syndrome 610713
Tags
Green Green List (high evidence)
HOXD13_SPD1_GCG
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Synpolydactyly 1 MIM#186000
Tags
  • paediatric-onset
Green Green List (high evidence)
HPGD
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Digital clubbing, isolated congenital 119900
  • Cranioosteoarthropathy 259100
  • Hypertrophic osteoarthropathy, primary, autosomal recessive 1 259100
Tags
Green Green List (high evidence)
HSPG2
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Dyssegmental dysplasia, Rolland-Desbuquois type (MONDO:0009139)
  • Dyssegmental dysplasia, Silverman-Handmaker type 224410
  • Schwartz-Jampel syndrome, type 1 255800
Tags
Green Green List (high evidence)
HYLS1
4 reviews
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Hydrolethalus syndrome MIM#236680
Tags
Green Green List (high evidence)
IDH1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Ollier disease/ Dyschondroplasia 166000
  • Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria 614875
  • Maffucci syndrome 614569
Tags
Green Green List (high evidence)
IDS
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis II 309900
Tags
Green Green List (high evidence)
IDUA
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis Is 607016
  • Mucopolysaccharidosis Ih/s 607015
  • Mucopolysaccharidosis Ih 607014
Tags
Green Green List (high evidence)
IFIH1
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Singleton-Merten syndrome 1, 182250
Tags
Green Green List (high evidence)
IFITM5
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Osteogenesis imperfecta, type V MIM#610967
Tags
  • 5'UTR
Green Green List (high evidence)
IFT122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Cranioectodermal dysplasia 1 218330
Tags
Green Green List (high evidence)
IFT140
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 9 with of without polydactyly, 266920
Tags
Green Green List (high evidence)
IFT172
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 10 with or without polydactyly, 615630
  • SRTD10
Tags
Green Green List (high evidence)
IFT43
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 18 with polydactyly - 617866
  • ?Cranioectodermal dysplasia 3 - 614099
Tags
Green Green List (high evidence)
IFT52
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • SHORT-RIB THORACIC DYSPLASIA 16 WITH OR WITHOUT POLYDACTYLY, SRTD16 #617102
Tags
Green Green List (high evidence)
IFT74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Jeune syndrome (MONDO:0018770), IFT74-related
Tags
Green Green List (high evidence)
IFT80
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 2 with or without polydactyly 611263
Tags
Green Green List (high evidence)
IFT81
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Other
Disease associations
  • Short-rib thoracic dysplasia 19 with or without polydactyly -617895
  • Short-Rib Polydactyly Syndrome
Tags
Green Green List (high evidence)
IHH
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Acrocapitofemoral dysplasia 607778
  • Brachydactyly, type A1 112500
Tags
Green Green List (high evidence)
IKBKG
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ectodermal, dysplasia, anhidrotic, lymphedema and immunodeficiency 300301
  • Incontinentia pigmenti 308300
Tags
Green Green List (high evidence)
IL11RA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Craniosynostosis and dental anomalies 614188
Tags
Green Green List (high evidence)
IL1RN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Interleukin 1 receptor antagonist deficiency 612852
  • Interleukin 1 receptor antagonist deficiency 612852
Tags
Green Green List (high evidence)
INPPL1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Opsismodysplasia 258480
Tags
Green Green List (high evidence)
2q37.3 terminal region (includes HDAC4) Loss
ISCA-37394-Loss
Region
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • ClinGen
  • Expert Review Green
  • NHS GMS
Disease associations
  • 2q37 deletion syndrome is a condition that can affect many parts of the body. This condition is characterized by weak muscle tone (hypotonia) in infancy, mild to severe intellectual disability and developmental delay, behavioral problems, characteristic facial features, and other physical abnormalities. PMID 23188045 brachydactyly-mental retardation syndrome, Albright hereditary osteodystrophy-like syndrome, developmental delay and behavioural abnormalities in combination
  • 600430
Tags
Green Green List (high evidence)
16p13.3 region (includes CREBBP) Loss
ISCA-37406-Loss
Region
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • ClinGen
  • Expert Review Green
  • NHS GMS
Disease associations
  • PMID: 10573006 death in infancy, accessory spleens, hypoplastic left heart, abnormal pulmonary lobulation, renal agenesis (patient 1), severe neonatal seizures (patient 2). PMID 16783566: failure to thrive, life-threatening malformations, and/or critical infections, and all died in infancy (5 weeks, 7 months, and 9 months, respectivelyFrom Genetics Home Reference: short stature, moderate to severe intellectual disability, distinctive facial features, and broad thumbs and first toes
  • 610543
Tags
Green Green List (high evidence)
17p11.2 recurrent (SMS/PLS) region (includes RAI1) Loss
ISCA-37418-Loss
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • ClinGen
  • Expert Review Green
  • NHS GMS
Disease associations
  • Smith-Magenis syndrome, MIM#182290
Tags
Green Green List (high evidence)
1p36 terminal region (includes GABRD) Loss
ISCA-37434-Loss
Region
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • ClinGen
  • Expert Review Green
  • NHS GMS
Disease associations
  • microcephaly
  • 1p36 deletion syndrome
  • large anterior fontanels
  • large, late-closing anterior fontanel
  • deep-set eyes
  • central nervous system anomalies
  • pointed chin
  • heart defects
  • poor/absent speech
  • hypotonia
  • brachycephaly
  • hearing impairment
  • 607872
  • growth impairment
  • flat nose
  • nasal bridge
  • mental retardation
  • seizures
  • epicanthus
  • microbrachycephaly
  • posteriorly rotated, low-set, abnormal ears
  • developmental delay
  • distinct dysmorphic features
Tags
Green Green List (high evidence)
11p11.2 (Potocki-Shaffer syndrome) region (includes ALX4, EXT2) Loss
ISCA-37441-Loss
Region
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • ClinGen
  • Expert Review Green
  • NHS GMS
Disease associations
  • parietal foramina
  • mental retardation
  • intellectual disability
  • ophthalmologic anomalies
  • Potocki-Shaffer syndrome
  • myopia
  • biparietal foramina
  • enlarged anterior fontanel
  • minor craniofacial anomalies
  • genital abnormalities in males
  • developmental delay
  • multiple exostoses
  • strabismus
  • 601224
Tags
Green Green List (high evidence)
17q23.1q23.2 recurrent region (includes TBX2, TBX4) Loss
ISCA-37501-Loss
Region
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Chromosome 17q23.1-q23.2 deletion syndrome, 613355
  • PMID:20206336 mild to moderate developmental delay (particularly speech delay), microcephaly, postnatal growth retardation, heart defects, hand, foot and limb abnormalities
  • PMID: 22052739 Developmental delay, heart defects, microcephaly, postnatal growth retardation, hand, foot and limb abnormalities, sensorineural hearing loss
Tags
Green Green List (high evidence)
KAT6B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • SBBYSS syndrome 603736
  • GTPTS,Ohdo
  • Genitopatellar syndrome 606170
Tags
Green Green List (high evidence)
KCNJ2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Andersen syndrome MIM#170390
Tags
Green Green List (high evidence)
KIAA0586
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Joubert syndrome 23 MIM#616490
  • Short-rib thoracic dysplasia 14 with polydactyly MIM#616546
Tags
Green Green List (high evidence)
KIAA0753
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • ?Orofaciodigital syndrome XV 617127
  • Joubert syndrome 38, MIM# 619476
  • Short-rib skeletal dysplasia
Tags
Green Green List (high evidence)
KIF22
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Spondyloepimetaphyseal dysplasia with joint laxity, type 2, MIM# 603546
Tags
Green Green List (high evidence)
KIF24
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Genomics England PanelApp
Disease associations
  • Skeletal dysplasia MONDO:0018230, KIF24 related
Tags
Green Green List (high evidence)
KIF5B
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Skeletal dysplasia, MONDO:0018230, KIF5B-related
  • Kyphomelic dysplasia
Tags
Green Green List (high evidence)
KIF7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Hydrolethalus syndrome 2 614120
  • Acrocallosal syndrome 200990
  • Joubert syndrome 12 200990
  • Al-Gazali-Bakalinova syndrome 607131
Tags
Green Green List (high evidence)
KMT2D
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Kabuki syndrome 1 - 147920
Tags
Green Green List (high evidence)
KYNU
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Hydroxykynureninuria MIM#236800
  • Vertebral, cardiac, renal, and limb defects syndrome 2 MIM#617661
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Green Green List (high evidence)
LBR
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Pelger-Huet anomaly with mild skeletal anomalies 618019
  • Greenberg skeletal dysplasia 215140
  • Pelger-Huet anomaly 169400
Tags
Green Green List (high evidence)
LEMD2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Marbach-Rustad progeroid syndrome MONDO:0859147
Tags
Green Green List (high evidence)
LEMD3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Melorheostosis with osteopoikilosis 155950 IC
  • Osteopoikilosis 166700
  • Buschke-Ollendorff syndrome 166700
Tags
Green Green List (high evidence)
LFNG
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Spondylocostal dysostosis 3, autosomal recessive MIM#609813
Tags
Green Green List (high evidence)
LIFR
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Stuve-Wiedemann syndrome/Schwartz-Jampel type 2 syndrome 601559
Tags
Green Green List (high evidence)
LMBR1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Laurin-Sandrow syndrome 135750
  • Polydactyly, preaxial type II 174500
  • Triphalangeal thumb, type I 174500
  • Syndactyly, type IV 186200
  • Acheiropody 200500
  • Triphalangeal thumb-polysyndactyly syndrome 174500
  • Hypoplastic or aplastic tibia with polydactyly 188740
Tags
Green Green List (high evidence)
LMNA
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
Disease associations
  • Emery-Dreifuss muscular dystrophy 2, 181350
  • Heart-hand syndrome, Slovenian type 610140
  • Foundation Trust) Mandibuloacral dysplasia 248370
  • Muscular dystrophy, limb-girdle, type 1B 159001
  • Malouf syndrome 212112
  • 616516
  • Cardiomyopathy, dilated, 1A 115200
  • Lipodystrophy, familial partial, 2 151660
  • Emery-Dreifuss muscular dystrophy 3, 616516
  • Charcot-Marie-Tooth disease, type 2B1 605588
  • Mandibuloacral dysplasia 248370
  • Restrictive dermopathy, lethal 275210
  • Hutchinson-Gilford progeria 176670
  • Muscular dystrophy, congenital 613205
Tags
Green Green List (high evidence)
LMX1B
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Nail-patella syndrome 161200
  • Nail-patella syndrome 161200
Tags
Green Green List (high evidence)
LONP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Disease associations
  • CODAS (Cerebral, Ocular, Dental, Auricular and Skeletal anomalies) syndrome 600373
Tags
Green Green List (high evidence)
LPIN2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Majeed syndrome (Chronic recurrent multifocal osteomyelitis with congenital dyserythropoietic anemia) 609628
Tags
Green Green List (high evidence)
LRP4
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Sclerosteosis 2 614305
  • Cenani-Lenz syndactyly syndrome 212780
Tags
Green Green List (high evidence)
LRP5
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • NHS GMS
Disease associations
  • Exudative vitreoretinopathy 4 601813
  • Osteoporosis-pseudoglioma syndrome 259770
  • [Bone mineral density variability 1] 601884
  • {Osteoporosis} 166710
  • van Buchem disease, type 2 607636
  • Osteopetrosis, autosomal dominant 1 607634
  • Hyperostosis, endosteal 144750
  • Osteosclerosis 144750
Tags
Green Green List (high evidence)
LRRK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Osteosclerotic metaphyseal dysplasia (OSMD) (OMIM: 615198)
Tags
Green Green List (high evidence)
LTBP3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Dental anomalies and short stature 610216
  • Geleophysic dysplasia 3 617809
  • Geleophysic dysplasia 3 617809
Tags
Green Green List (high evidence)
LYSET
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Dysostosis multiplex, Ain-Naz type 619345
Tags
  • new gene name
Green Green List (high evidence)
MAB21L2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • Microphthalmia/coloboma and skeletal dysplasia syndrome, MIM# 615877
Tags
Green Green List (high evidence)
MAFB
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Multicentric carpotarsal osteolysis syndrome 166300
Tags
Green Green List (high evidence)
MAN2B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mannosidosis, alpha-, types I and II 248500
Tags
Green Green List (high evidence)
MAP3K7
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Frontometaphyseal dysplasia 2, 617137
Tags
Green Green List (high evidence)
MASP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • 3MC syndrome 1 - 257920
Tags
Green Green List (high evidence)
MATN3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • MED
  • Multiple Epiphyseal Dysplasia, Dominant
  • Disproportionate Short Stature
  • Spondyloepimetaphyseal dysplasia, 608728
  • Epiphyseal dysplasia, multiple, 5, 607078
  • {Osteoarthritis susceptibility 2}, 140600
  • multiple epiphyseal dysplasia
Tags
Green Green List (high evidence)
MBTPS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Skeletal dysplasia
Tags
Green Green List (high evidence)
MECOM
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
  • Literature
  • Victorian Clinical Genetics Services
Disease associations
  • Radioulnar synostosis with amegakaryocytic thrombocytopenia 2, OMIM # 616738
  • Radioulnar synostosis without hematological aberration, no OMIM #
Tags
Green Green List (high evidence)
MEG3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Kagami-Ogata syndrome, MIM# 608149
Tags
  • non-coding gene
  • SV/CNV
Green Green List (high evidence)
MEGF8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Carpenter syndrome 2 614976
Tags
Green Green List (high evidence)
MEOX1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Klippel-Feil syndrome 2 214300
Tags
Green Green List (high evidence)
MESD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Disease associations
  • Osteogenesis imperfecta, type XX, MIM# 618644
Tags
Green Green List (high evidence)
MESP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondylocostal dysostosis 2, autosomal recessive 608681
Tags
Green Green List (high evidence)
MGP
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Keutel syndrome 245150
  • skeletal dysplasia MONDO:0018230, MGP-related
Tags
Green Green List (high evidence)
MIA3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Ondontochondrodysplasia 2 with hearing loss and diabetes , MIM#619269
Tags
Green Green List (high evidence)
MKKS
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 6, 605231
  • Polydactyly
  • McKusick-Kaufman syndrome, 236700
Tags
Green Green List (high evidence)
MKS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 1 249000
  • Bardet-Biedl syndrome 13 615990
Tags
Green Green List (high evidence)
MMP13
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Metaphyseal anadysplasia 1 602111
  • Spondyloepimetaphyseal dysplasia, Missouri type 602111
  • Metaphyseal dysplasia, Spahr type - 250400
Tags
Green Green List (high evidence)
MMP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Multicentric osteolysis, nodulosis, and arthropathy 259600
Tags
Green Green List (high evidence)
MMP9
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • 613073METAPHYSEAL ANADYSPLASIA 2
  • Metaphyseal anadysplasia 2 613073
Tags
Green Green List (high evidence)
MNX1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Currarino syndrome 176450
Tags
Green Green List (high evidence)
MPDU1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type If, MIM# 609180
  • MPDU1-CDG, MONDO:0012211
Tags
Green Green List (high evidence)
MSX2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Parietal foramina 1 168500
  • Parietal foramina with cleidocranial dysplasia 168550
  • Craniosynostosis, type 2 604757
Tags
Green Green List (high evidence)
MTX2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Mandibuloacral dysplasia progeroid syndrome, MIM# 619127
  • Mandibuloacral dysplasia
  • lipodystrophy
  • arterial calcification
Tags
Green Green List (high evidence)
MYCN
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Feingold syndrome (Microcephaly-oculo-digito-esophageal-duodenal) 164280
Tags
Green Green List (high evidence)
MYH3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Arthrogryposis, distal, type 2A (Freeman-Sheldon) 193700
  • Arthrogryposis, distal, type 2B3 (Sheldon-Hall) 618436
  • Contractures, pterygia, and spondylocarpostarsal fusion syndrome 1A 178110
  • Contractures, pterygia, and spondylocarpotarsal fusion syndrome 1B 618469
Tags
Green Green List (high evidence)
MYO18B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Klippel-Feil syndrome 4, autosomal recessive, with myopathy and facial dysmorphism, MIM# 616549
Tags
Green Green List (high evidence)
NAGLU
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Royal Melbourne Hospital
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis type IIIB (Sanfilippo B) 252920
Tags
Green Green List (high evidence)
NANS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Spondyloepimetaphyseal dysplasia, Camera-Genevieve type 610442
Tags
Green Green List (high evidence)
NBAS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature, optic nerve atrophy, and Pelger-Huet anomaly, 614800
Tags
Green Green List (high evidence)
NEK1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short rib thoracic dysplasia 6 with or without polydactyly - 263520
  • Short rib-polydactyly syndrome, type IIA, 263520
  • Short Rib Polydactyly Syndrome
  • SRPS type 2 (Majewski)
Tags
Green Green List (high evidence)
NEU1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Sialidosis, type I 256550
  • Sialidosis, type II 256550
Tags
Green Green List (high evidence)
NF1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Neurofibromatosis-Noonan syndrome 601321
  • Neurofibromatosis, type 1 162200
  • Neurofibromatosis, type 1 162200
  • Neurofibromatosis, familial spinal 162210
  • Neurofibromatosis-Noonan syndrome 601321
  • Neurofibromatosis, familial spinal 162210
Tags
Green Green List (high evidence)
NFIX
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Marshall-Smith syndrome 602535
  • Sotos syndrome 2 614753
Tags
Green Green List (high evidence)
NIPBL
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Cornelia de Lange syndrome 1 122470
Tags
Green Green List (high evidence)
NKX3-2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Spondylo-megaepiphyseal-metaphyseal dysplasia 613330
Tags
Green Green List (high evidence)
NLRP3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Chronic infantile neurologic cutaneous articular syndrome (CINA) - 607115
  • CINCA (Infantile-onset multisystem inflammatory disease) 607115
Tags
Green Green List (high evidence)
NOG
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • NOG-related symphalangism spectrum disorder MONDO:0100521
Tags
Green Green List (high evidence)
NOTCH1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
Disease associations
  • Combination of aplasia cutis congenita of the scalp vertex and terminal transverse limb defects (e.g., amputations, syndactyly, brachydactyly, or oligodactyly)
  • Limb, scalp and skull defects
  • Adams-Oliver syndrome 5, 616028
  • AOS
Tags
Green Green List (high evidence)
NOTCH2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
Disease associations
  • Alagille syndrome 2 610205
  • Hajdu-Cheney (Serpentine fibula polycystic kidney) syndrome 102500
Tags
Green Green List (high evidence)
NPR2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature with nonspecific skeletal abnormalities 616255
  • Epiphyseal chondrodysplasia, Miura type 615923
  • Acromesomelic dysplasia, Maroteaux type 602875
Tags
Green Green List (high evidence)
NSD1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Sotos syndrome 1 117550
Tags
Green Green List (high evidence)
NSDHL
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • CK syndrome 300831
  • Congenital hemidysplasia, ichthyosis, limb defects (CHILD) syndrome 308050
Tags
Green Green List (high evidence)
NXN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow syndrome, autosomal recessive 2 618529
Tags
Green Green List (high evidence)
OBSL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • 3-M syndrome 2 612921
Tags
Green Green List (high evidence)
OFD1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Orofaciodigital syndrome I 311200 XLD
  • Simpson-Golabi-Behmel syndrome, type 2 300209 XLR
  • Joubert syndrome 10 300804
Tags
Green Green List (high evidence)
ORC1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meier-Gorlin syndrome 1 224690
  • Meier-Gorlin syndrome 1 224690
Tags
Green Green List (high evidence)
ORC4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meier-Gorlin syndrome 2 613800
  • Meier-Gorlin syndrome 2 613800
Tags
Green Green List (high evidence)
ORC6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meier-Gorlin syndrome 3 613803
  • Meier-Gorlin syndrome 3 613803
Tags
Green Green List (high evidence)
OSR2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Skeletal dysplasia, MONDO:0018230, OSR2-related
Tags
Green Green List (high evidence)
OSTM1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Osteopetrosis, autosomal recessive 5 259720
Tags
Green Green List (high evidence)
P3H1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • UKGTN
Disease associations
  • Osteogenesis imperfecta, type VIII 610915
Tags
Green Green List (high evidence)
P4HB
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cole-Carpenter syndrome 1 112240
  • Cole-Carpenter syndrome 1 112240
Tags
Green Green List (high evidence)
PAM16
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondylometaphyseal dysplasia, Megarbane-Dagher-Melike type 613320
Tags
Green Green List (high evidence)
PAPSS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Brachyolmia 4 with mild epiphyseal and metaphyseal changes MIM#612847
Tags
Green Green List (high evidence)
PAX3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
Disease associations
  • Waardenburg syndrome, type 3, 148820
  • Craniofacial-deafness-hand syndrome, 122880
  • Waardenburg syndrome, type 1, 193500
Tags
Green Green List (high evidence)
PCNT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Microcephalic osteodysplastic primordial dwarfism, type II 210720
Tags
Green Green List (high evidence)
PCYT1A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Spondylometaphyseal dysplasia with cone-rod dystrophy 608940
  • Spondylometaphyseal dysplasia with cone-rod dystrophy 608940
Tags
Green Green List (high evidence)
PDE3A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Hypertension and brachydactyly syndrome, 112410
Tags
Green Green List (high evidence)
PDE4D
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Acrodysostosis 2, with or without hormone resistance 614613
  • Acrodysostosis 2, with or without hormone resistance 614613
Tags
Green Green List (high evidence)
PDIA6
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • multiple congenital anomalies, MONDO:0019042, PDIA6-related
Tags
Green Green List (high evidence)
PEX5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Rhizomelic chondrodysplasia punctata, type 5 616716
  • Peroxisome biogenesis disorder 2A (Zellweger) 214110
Tags
Green Green List (high evidence)
PEX7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Rhizomelic CDP type 1
  • Rhizomelic chondrodysplasia punctata, type 1, 215100
Tags
Green Green List (high evidence)
PGM3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Immunodeficiency 23 615816
  • Immunodeficiency 23 615816
Tags
Green Green List (high evidence)
PHEX
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Hypophosphatemic rickets, X-linked dominant 307800
Tags
Green Green List (high evidence)
PHF6
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Borjeson-Forssman-Lehmann syndrome, MIM# 301900
Tags
Green Green List (high evidence)
PHGDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Phosphoglycerate dehydrogenase deficiency 601815
  • Neu-Laxova syndrome 1 256520
Tags
Green Green List (high evidence)
PIGT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Multiple congenital anomalies-hypotonia-seizures syndrome 3 615398
Tags
Green Green List (high evidence)
PIGV
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Hyperphosphatasia with mental retardation syndrome 1 239300
Tags
Green Green List (high evidence)
PIK3C2A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Literature
Disease associations
  • Oculoskeletodental syndrome 618440
Tags
Green Green List (high evidence)
PIK3R1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • SHORT syndrome 269880
Tags
Green Green List (high evidence)
PISD
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Liberfarb syndrome MIM# 618889
  • Spondylometaphyseal dysplasia with large epiphyses, MONDO:0100510
Tags
Green Green List (high evidence)
PITX1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Liebenberg syndrome 186550
  • Clubfoot, congenital, with or without deficiency of long bones and/or mirror-image polydactyly 119800
Tags
Green Green List (high evidence)
PITX1 upstream regulatory region
PITX1 upstream regulatory region
Region
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Liebenberg syndrome, MIM#186550
Tags
  • regulatory region
Green Green List (high evidence)
PKDCC
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Rhizomelic limb shortening with dysmorphic features, MIM# 618821
Tags
Green Green List (high evidence)
PLOD2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Bruck syndrome 2 609220
Tags
Green Green List (high evidence)
PLS3
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Bone mineral density QTL18, osteoporosis 300910
Tags
Green Green List (high evidence)
POC1A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature-onychodysplasia-facial dysmorphism-hypotrichosis syndrome, MONDO:0013894
Tags
Green Green List (high evidence)
POLR1A
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Acrofacial dysostosis, Cincinnati type 616462
Tags
Green Green List (high evidence)
POLR1B
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Treacher-Collins syndrome type 4
Tags
Green Green List (high evidence)
POLR1C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Treacher Collins syndrome 3 248390
Tags
Green Green List (high evidence)
POLR1D
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Treacher Collins syndrome 2 613717
Tags
Green Green List (high evidence)
POP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Anauxetic dysplasia 2, 617396
Tags
Green Green List (high evidence)
POR
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis 201750
  • Disordered steroidogenesis due to cytochrome P450 oxidoreductase 613571
Tags
Green Green List (high evidence)
PPIB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type IX 259440
  • Osteogenesis imperfecta, type IX 259440
Tags
Green Green List (high evidence)
PRKAR1A
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Pigmented nodular adrenocortical disease, primary, 1 610489
  • Acrodysostosis 1, with or without hormone resistance 101800
  • Myxoma, intracardiac 255960
Tags
Green Green List (high evidence)
PRKG2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Acromesomelic dysplasia 4, MIM# 619636
  • Spondylometaphyseal dysplasia, Pagnamenta type, MIM# 619638
Tags
Green Green List (high evidence)
PRMT7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature, brachydactyly, intellectual developmental disability, and seizures 617157
Tags
Green Green List (high evidence)
PSAT1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Neu-Laxova syndrome 2 616038
Tags
Green Green List (high evidence)
PSPH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Phosphoserine phosphatase deficiency 614023
Tags
Green Green List (high evidence)
PTBP1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • STAD syndrome, MIM# 621495
Tags
Green Green List (high evidence)
PTDSS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Lenz-Majewski hyperostotic dwarfism 151050
Tags
Green Green List (high evidence)
PTH1R
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Failure of tooth eruption, primary 125350
  • Eiken syndrome 600002
  • Metaphyseal chondrodysplasia, Murk Jansen type 156400
  • Chondrodysplasia, Blomstrand type 215045
Tags
Green Green List (high evidence)
PTHLH
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Brachydactyly, type E2 613382
  • Brachydactyly, type E2 613382
Tags
Green Green List (high evidence)
PTPN11
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • LEOPARD syndrome 1 151100
  • Noonan syndrome 1 163950
  • Metachondromatosis 156250
  • LEOPARD syndrome 1 151100
Tags
Green Green List (high evidence)
PUF60
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
  • Other
Disease associations
  • Verheij syndrome, 615583
  • Chromosome 8q24.3 deletion syndrome
  • VRJS
  • PUF60 syndrome
Tags
Green Green List (high evidence)
PYCR1
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
Disease associations
  • Cutis laxa, autosomal recessive, type IIIB 614438
  • Cutis laxa, autosomal recessive, type IIB 612940
Tags
Green Green List (high evidence)
RAB23
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Carpenter syndrome 201000
Tags
Green Green List (high evidence)
RAB33B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Smith-McCort dysplasia 2 615222
Tags
Green Green List (high evidence)
RAB34
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Orofaciodigital syndrome 20, MIM#620718
Tags
Green Green List (high evidence)
RAB3GAP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Martsolf syndrome 1 MIM#212720
Tags
Green Green List (high evidence)
RASGRP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Bleeding disorder, platelet-type, 18 615888, also with osteopetrosis like bone abnormalities and neurodevelopmental defects
  • Bleeding disorder, platelet-type, 18 615888
Tags
Green Green List (high evidence)
RBBP8
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Jawad syndrome, MIM#251255
  • Seckel syndrome 2, MIM#606744
Tags
Green Green List (high evidence)
RBM8A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Thrombocytopenia-absent radius syndrome 274000
Tags
Green Green List (high evidence)
RBPJ
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Adams-Oliver syndrome 3, 614814
Tags
Green Green List (high evidence)
RECQL4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Rothmund-Thomson syndrome 268400
  • Baller-Gerold syndrome 218600
  • RAPILINO syndrome 266280
Tags
Green Green List (high evidence)
RFT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type In 612015
Tags
Green Green List (high evidence)
RIGI
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Singleton-Merten syndrome 2, MIM# 616298
Tags
  • new gene name
Green Green List (high evidence)
RIPPLY2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondylocostal dysostosis 6, MIM# 616566
Tags
Green Green List (high evidence)
RMP64
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Anauxetic dysplasia 3, MIM618853
Tags
Green Green List (high evidence)
RMRP
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Anauxetic dysplasia 607095
  • Cartilage-hair hypoplasia 250250
  • Metaphyseal dysplasia without hypotrichosis 250460
Tags
  • non-coding gene
Green Green List (high evidence)
RNU4ATAC
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Microcephalic osteodysplastic primordial dwarfism, type I 210710
  • Roifman syndrome 616651
Tags
  • non-coding gene
Green Green List (high evidence)
ROR2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Brachydactyly, type B1 113000
  • Robinow syndrome, autosomal recessive 268310
Tags
Green Green List (high evidence)
RPGRIP1L
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • COACH syndrome 216360
  • Joubert syndrome 7 611560
  • Meckel syndrome 5 611561
Tags
Green Green List (high evidence)
RPL13
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Spondyloepimetaphyseal Dysplasia with Severe Short Stature
Tags
Green Green List (high evidence)
RSPRY1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Disease associations
  • Spondyloepimetaphyseal dysplasia, Faden-Alkuraya type, MIM# 616723
Tags
Green Green List (high evidence)
RUNX2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Cleidocranial dysplasia, forme fruste, dental anomalies only 119600
  • Metaphyseal dysplasia with maxillary hypoplasia with or without brachydactyly 156510
  • Cleidocranial dysplasia, forme fruste, with brachydactyly 119600
  • Cleidocranial dysplasia 119600
Tags
Green Green List (high evidence)
SALL1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Townes Brocks syndrome (Renal-Ear-Anal-Radial syndrome) 107480
Tags
Green Green List (high evidence)
SALL4
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • IVIC syndrome 147750
  • Okihiro (Duane-radial ray) syndrome 607323
Tags
Green Green List (high evidence)
SBDS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Shwachman-Diamond syndrome 260400
  • Shwachman-Diamond syndrome 260400
Tags
Green Green List (high evidence)
SCARF2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Van den Ende-Gupta syndrome 600920
Tags
Green Green List (high evidence)
SCUBE3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies, MIM# 619184
  • Short stature
  • skeletal abnormalities
  • craniofacial abnormalities
  • dental anomalies
Tags
Green Green List (high evidence)
SEC24D
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
  • Literature
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cole-Carpenter syndrome
  • SYNDROMIC OSTEOGENESIS IMPERFECTA
  • Osteogenesis Imperfecta, Cole Carpenter syndrome
Tags
Green Green List (high evidence)
SERPINF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • OI/osteoporosis
  • osteogenesis imperfecta
  • Osteogenesis Imperfecta, Recessive
  • Osteogenesis imperfecta, type VI, 613982
Tags
Green Green List (high evidence)
SERPINH1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type X, 613848
  • OI3
  • Osteogenesis Imperfecta and Decreased Bone Density
  • {Preterm premature rupture of the membranes, susceptibility to}, 610504
  • skeletal dysplasias
  • Osteogenesis Imperfecta, Recessive
Tags
Green Green List (high evidence)
SETD2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Luscan-Lumish syndrome 616831
Tags
Green Green List (high evidence)
SF3B4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Acrofacial dysostosis 1, Nager type 154400
Tags
Green Green List (high evidence)
SFRP4
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Pyle disease, MIM#265900
Tags
Green Green List (high evidence)
SGSH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidisis type IIIA (Sanfilippo A) 252900
Tags
Green Green List (high evidence)
SH3BP2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Cherubism 118400
Tags
Green Green List (high evidence)
SH3PXD2B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Frank-ter Haar syndrome 249420
Tags
Green Green List (high evidence)
SHOX
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Leri-Weill dyschondrosteosis 127300
  • Short stature, idiopathic familial 300582
  • Langer mesomelic dysplasia 249700
Tags
Green Green List (high evidence)
SHOX downstream regulatory region
SHOX downstream regulatory region
Region
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Leri-Weill dyschondrosteosis (MIM#127300)
  • Short stature, idiopathic familial (MIM#300582)
Tags
  • regulatory region
Green Green List (high evidence)
SKI
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Shprintzen-Goldberg syndrome 182212
Tags
Green Green List (high evidence)
SLC10A7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Victorian Clinical Genetics Services
Disease associations
  • skeletal dysplasia and amelogenesis imperfecta
  • Short stature, amelogenesis imperfecta, and skeletal dysplasia with scoliosis 618363
Tags
Green Green List (high evidence)
SLC17A5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Sialic acid storage disorder, infantile 269920
Tags
Green Green List (high evidence)
SLC26A2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
Disease associations
  • multiple epiphyseal dysplasia
  • Epiphyseal dysplasia, multiple, 4
  • ACG1B,DD,rMED
  • Multiple Epiphyseal Dysplasia, Recessive
Tags
Green Green List (high evidence)
SLC29A3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Histiocytosis-lymphadenopathy plus syndrome 602782
Tags
Green Green List (high evidence)
SLC34A1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Nephrolithiasis/osteoporosis, hypophosphatemic, 1, 612286
Tags
Green Green List (high evidence)
SLC34A3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Hypophosphatemic rickets with hypercalciuria 241530
Tags
Green Green List (high evidence)
SLC35C1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • GDP-fucose transporter deficiency (Disorders of multiple glycosylation and other glycosylation pathways)
  • Congenital disorder of glycosylation, type IIc 266265
Tags
Green Green List (high evidence)
SLC35D1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Schneckenbecken dysplasia 269250
  • Schneckenbecken dysplasia 269250
Tags
Green Green List (high evidence)
SLC39A13
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Spondylocheirodysplasia, Ehlers-Danlos syndrome-like 612350
Tags
Green Green List (high evidence)
SLCO2A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypertrophic osteoarthropathy, primary, autosomal recessive 2 614441
  • Hypertrophic osteoarthropathy, primary, autosomal recessive 2 614441
Tags
Green Green List (high evidence)
SMAD3
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Loeys-Dietz syndrome 3 613795
Tags
Green Green List (high evidence)
SMAD4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Myhre syndrome 139210
  • Myhre syndrome 139210
Tags
Green Green List (high evidence)
SMAD6
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Disease associations
  • {Radioulnar synostosis, nonsyndromic} 179300
Tags
Green Green List (high evidence)
SMARCAL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Schimke immunoosseous dysplasia 242900
  • Schimke immunoosseous dysplasia 242900
Tags
Green Green List (high evidence)
SMARCB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Coffin-Siris syndrome 3, MIM# 614608
Tags
Green Green List (high evidence)
SMARCE1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Coffin-Siris syndrome 5, MIM# 616938
Tags
Green Green List (high evidence)
SMC1A
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Cornelia de Lange syndrome 2 300590
Tags
Green Green List (high evidence)
SMC3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Cornelia de Lange syndrome 3 610759
Tags
Green Green List (high evidence)
SMOC1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Ophthalmo-acromelic syndrome
  • Polydactyly
  • Microphthalmia with limb anomalies 206920
Tags
Green Green List (high evidence)
SNRPB
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cerebrocostomandibular syndrome 117650
Tags
Green Green List (high evidence)
SNX10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopetrosis, autosomal recessive 8 615085
Tags
Green Green List (high evidence)
SOST
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
  • NHS GMS
Disease associations
  • Craniodiaphyseal dysplasia, autosomal dominant 122860
  • Van Buchem disease 239100
  • Sclerosteosis 1 269500
Tags
Green Green List (high evidence)
SOX11
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Coffin-Siris syndrome MONDO:0015452
Tags
Green Green List (high evidence)
SOX9
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Campomelic dysplasia with autosomal sex reversal 114290
  • Campomelic dysplasia 114290
  • Acampomelic campomelic dysplasia 114290
Tags
Green Green List (high evidence)
SP7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type XII 613849
Tags
Green Green List (high evidence)
SPARC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type XVII 616507
Tags
Green Green List (high evidence)
STT3A
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Congenital disorder of glycosylation, type Iw MIM#615596
Tags
Green Green List (high evidence)
SUMF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Multiple sulfatase deficiency 272200
Tags
Green Green List (high evidence)
TAB2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Mitral valve disease, cardiomyopathy, short stature and hypermobility, Noonan syndrome-like
  • Congenital heart defects, nonsyndromic, 2 (MIM#614980)
Tags
Green Green List (high evidence)
TALDO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Transaldolase deficiency 606003
Tags
Green Green List (high evidence)
TBCE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hypoparathyroidism-retardation-dysmorphism syndrome 241410
  • Kenny-Caffey syndrome, type 1 244460.
  • Kenny-Caffey syndrome, type 1 244460
Tags
Green Green List (high evidence)
TBX15
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Cousin syndrome 260660
Tags
Green Green List (high evidence)
TBX2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Vertebral anomalies and variable endocrine and T-cell dysfunction - MIM#618223
Tags
Green Green List (high evidence)
TBX3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ulnar-mammary syndrome 181450
Tags
Green Green List (high evidence)
TBX4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ischiocoxopodopatellar syndrome 147891
  • Ischiocoxopodopatellar syndrome 147891
Tags
Green Green List (high evidence)
TBX5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Holt-Oram syndrome 142900
Tags
Green Green List (high evidence)
TBX6
4 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Spondylocostal dysostosis 5 122600
Tags
Green Green List (high evidence)
TBXAS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Ghosal hematodiaphyseal syndrome MIM#231095
Tags
Green Green List (high evidence)
TCIRG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopetrosis, autosomal recessive 1 259700
Tags
Green Green List (high evidence)
TCOF1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Treacher Collins syndrome 1 154500
Tags
Green Green List (high evidence)
TCTN2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 8 613885
  • Joubert syndrome 24 616654
Tags
Green Green List (high evidence)
TCTN3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Orofaciodigital syndrome IV 258860
  • Joubert syndrome 18 614815
Tags
Green Green List (high evidence)
TEDC1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Primary microcephaly, MONDO:0016660
Tags
  • new gene name
Green Green List (high evidence)
TENT5A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Disease associations
  • Osteogenesis imperfecta, type XVIII 617952
Tags
Green Green List (high evidence)
TERT
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Dyskeratosis congenita, autosomal dominant 2 and autosomal recessive 4 613989
Tags
Green Green List (high evidence)
TGFB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Camurati-Engelmann disease 131300
  • Camurati-Engelmann disease 131300
Tags
Green Green List (high evidence)
TGFB2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Loeys-Dietz syndrome 4, MIM# 614816
  • Camurati-Engelmann disease 2, MIM# 606631
Tags
Green Green List (high evidence)
TGFBR2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Loeys-Dietz syndrome 2 610168
Tags
Green Green List (high evidence)
TMCO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Craniofacial dysmorphism, skeletal anomalies, and mental retardation syndrome 213980
  • Craniofacial dysmorphism, skeletal anomalies, and mental retardation syndrome 213980
Tags
Green Green List (high evidence)
TMEM165
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type IIk 614727
Tags
Green Green List (high evidence)
TMEM216
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 2 603194
  • Joubert syndrome 2 608091
Tags
Green Green List (high evidence)
TMEM231
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 11 615397
  • Joubert syndrome 20 614970
Tags
Green Green List (high evidence)
TMEM38B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Osteogenesis imperfecta, type XIV 615066
  • osteogenesis imperfecta
  • Osteogenesis imperfecta, type XIV, 615066
Tags
Green Green List (high evidence)
TMEM53
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Primary Bone Dysplasia MONDO: 0018230
Tags
Green Green List (high evidence)
TNFRSF11A
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Osteolysis, familial expansile 174810
  • Paget disease of bone 2, early-onset 602080
  • Osteopetrosis, autosomal recessive 7 612301
Tags
Green Green List (high evidence)
TNFRSF11B
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • juvenile Paget disease MONDO:0009394
  • chondrocalcinosis 1 MONDO:0010917
Tags
Green Green List (high evidence)
TNFSF11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopetrosis, autosomal recessive 2 259710
Tags
Green Green List (high evidence)
TONSL
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Spondyloepimetaphyseal dysplasia, sponastrime type OMIM:271510
  • spondyloepimetaphyseal dysplasia, sponastrime type MONDO:0010068
Tags
Green Green List (high evidence)
TP63
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations, MONDO:1040001
Tags
Green Green List (high evidence)
TRAPPC2
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
Disease associations
  • Spondyloepiphyseal dysplasia tarda, MIM# 313400
Tags
Green Green List (high evidence)
TREM2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Nasu-Hakola disease 221770
Tags
Green Green List (high evidence)
TRIP11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Achondrogenesis, type IA 200600
  • Achondrogenesis, type IA 200600
Tags
Green Green List (high evidence)
TRPS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Trichorhinophalangeal syndrome, type I 190350
  • Trichorhinophalangeal syndrome, type III 190351
Tags
Green Green List (high evidence)
TRPV4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Digital arthropathy-brachydactyly, familial 606835
  • Parastremmatic dwarfism 168400
  • Scapuloperoneal spinal muscular atrophy 181405
  • SED, Maroteaux type 184095
  • Brachyolmia type 3 113500
  • Hereditary motor and sensory neuropathy, type IIc 606071
  • Spinal muscular atrophy, distal, congenital nonprogressive 600175
  • Metatropic dysplasia 156530
  • Spondylometaphyseal dysplasia, Kozlowski type 184252
Tags
Green Green List (high evidence)
TRPV6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Victorian Clinical Genetics Services
Disease associations
  • Hyperparathyroidism, transient neonatal, 618188
Tags
Green Green List (high evidence)
TTC21B
3 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • SRTD4
  • Asphyxiating Thoracic Dystrophy
  • Nephronophthisis 12, 613820
Tags
Green Green List (high evidence)
TTC8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet-Biedl syndrome 8, 615985
Tags
Green Green List (high evidence)
TWIST1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Craniosynostosis, type 1 123100
  • Saethre-Chotzen syndrome with eyelid anomalies 101400
  • Saethre-Chotzen syndrome 101400
  • Robinow-Sorauf syndrome 180750
Tags
Green Green List (high evidence)
TYROBP
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Nasu-Hakola disease 221770
Tags
Green Green List (high evidence)
UBA2
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Disease associations
  • ACCES syndrome, MIM# 619959
  • Split-Hand/Foot Malformation
  • Aplasia Cutis Congenita
  • Ectrodactyly
Tags
Green Green List (high evidence)
UFSP2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • NHS GMS
Disease associations
  • Hip dysplasia, Beukes type, MIM#142669
  • Spondyloepimetaphyseal dysplasia, Di Rocco type, MIM# 617974
Tags
Green Green List (high evidence)
USP9X
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
Disease associations
  • Intellectual developmental disorder 99 MIM#300919
  • syndromic, female-restricted Intellectual developmental disorder 99 MIM#300968
Tags
Green Green List (high evidence)
VDR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Rickets, vitamin D-resistant, type IIA, 277440
Tags
Green Green List (high evidence)
VPS33A
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Disease associations
  • Mucopolysaccharidosis-plus syndrome (MIM#617303)
Tags
Green Green List (high evidence)
WBP11
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Vertebral, cardiac, tracheoesophageal, renal, and limb defects, MIM# 619227
  • malformation syndrome affecting the cardiac, skeletal, gastrointestinal and renal systems
Tags
Green Green List (high evidence)
WDHD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • microcephalic osteodysplastic primordial dwarfism, MONDO:0000060
Tags
Green Green List (high evidence)
WDPCP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
Disease associations
  • ?Bardet-Biedl syndrome 15, 615992
  • ?Congenital heart defects, hamartomas of tongue, and polysyndactyly 217085
Tags
Green Green List (high evidence)
WDR19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short-rib thoracic dysplasia 5 with or without polydactyly, 614376
  • Asphyxiating thoracic dystrophy 5, 614376
  • Cranioectodermal dysplasia 4, 614378
  • SRTD5
Tags
Green Green List (high evidence)
WDR35
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Cranioectodermal dysplasia 2 613610
  • Short-rib thoracic dysplasia 7 with or without polydactyly 614091
Tags
Green Green List (high evidence)
WNT1
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • OI/osteoporosis
  • osteogenesis imperfecta
  • Osteogenesis imperfecta, type XV, 615220
  • {Osteoporosis, early-onset, susceptibility to, autosomal dominant}, 615221
Tags
Green Green List (high evidence)
WNT10B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Split-hand/foot malformation 6 225300
Tags
Green Green List (high evidence)
WNT5A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Robinow syndrome, autosomal dominant 1 180700
Tags
Green Green List (high evidence)
WNT7A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Fuhrmann syndrome, MIM# 228930
  • Ulna and fibula, absence of, with severe limb deficiency, MIM# 276820
  • Santos syndrome, MIM# 613005
Tags
Green Green List (high evidence)
XRCC4
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature, microcephaly, and endocrine dysfunction 616541
Tags
Green Green List (high evidence)
XYLT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Desbuquois dysplasia 2 615777
  • Desbuquois dysplasia 2 615777
Tags
Green Green List (high evidence)
XYLT1_DBQD2_GGC
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Disease associations
  • Desbuquois dysplasia 2 MIM#615777
Tags
Green Green List (high evidence)
XYLT2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Spondyloocular syndrome 605822
Tags
Green Green List (high evidence)
YY1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Disease associations
  • Gabriele-de Vries syndrome 617557
  • Gabriele-de Vries syndrome 617557
Tags
Green Green List (high evidence)
ZMPSTE24
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Restrictive dermopathy, lethal 275210
  • Mandibuloacral dysplasia with type B lipodystrophy 608612
Tags
Green Green List (high evidence)
ZSWIM6
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Acromelic frontonasal dysostosis 603671
Tags
Amber Amber List (moderate evidence)
BNIP1
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Spondylopeiphyseal dysplasia, Holling type, MIM# 621345
Tags
Amber Amber List (moderate evidence)
CCN2
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Kyphomelic dysplasia MONDO:0008881
  • Spondyloepimetaphyseal dysplasia MONDO:0100510
Tags
Amber Amber List (moderate evidence)
CHST11
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Disease associations
  • Osteochondrodysplasia, brachydactyly, and overlapping malformed digits, MIM# 618167
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
CPAP
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Seckel syndrome 4, MIM# 613676
Tags
Amber Amber List (moderate evidence)
DVL2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Robinow syndrome MONDO:0019978
Tags
Amber Amber List (moderate evidence)
FGF4
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Short-rib thoracic dysplasia 22 without polydactyly, MIM# 621260
Tags
Amber Amber List (moderate evidence)
FGF8
2 reviews
Unknown
Sources
  • Expert Review Amber
Disease associations
  • Numerous variants reported in Hypogonadotropic hypogonadism 6 with or without anosmia 612702, but this phenotype is not relevant to this panel.
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
HDAC4
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Albright hereditary osteodystrophy-like syndrome
  • Albright hereditary osteodystrophy type 3, Albright hereditary osteodystrophy-like syndrome, Brachydactyly-intellectual disability, Del(2)(q37) 600430
  • Albright hereditary osteodystrophy type 3
  • Brachydactyly-intellectual disability
  • Del(2)(q37) 600430
Tags
Amber Amber List (moderate evidence)
HNRNPK
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert Review Green
  • NHS GMS
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • OMIM:616580
  • Orphanet:453499
  • Au-Kline syndrome:616580
  • Neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome due to a point mutation
Tags
Amber Amber List (moderate evidence)
LRRC8C
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • TIMES syndrome MIM#621056
Tags
Amber Amber List (moderate evidence)
MANBA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Beta-mannosidosis, 248510
Tags
Amber Amber List (moderate evidence)
MET
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • {Osteofibrous dysplasia, susceptibility to} 607278
Tags
Amber Amber List (moderate evidence)
MIR140
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Amber
Disease associations
  • Spondyloepiphyseal dysplasia, Nishimura type, MIM# 618618
Tags
  • non-coding gene
Amber Amber List (moderate evidence)
MIR17HG
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Disease associations
  • FS2
  • Microcephaly-oculo-digito-esophageal-duodenal syndrome
  • Brachydactyly with short stature and microcephaly
  • Feingold syndrome 2, 614326
Tags
  • non-coding gene
  • SV/CNV
Amber Amber List (moderate evidence)
MMP14
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
Disease associations
  • Winchester syndrome 277950
Tags
Amber Amber List (moderate evidence)
MTAP
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Diaphyseal medullary stenosis with malignant fibrous histiocytoma, MIM# 112250
Tags
Amber Amber List (moderate evidence)
NMNAT1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert List
  • Expert Review Amber
Disease associations
  • Spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual disability, and Leber congenital amaurosis (SHILCA), MIM#619260
Tags
Amber Amber List (moderate evidence)
PFN1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Paget disease of bone 7, early-onset, MIM# 621600
Tags
Amber Amber List (moderate evidence)
RAD21
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Cornelia de Lange syndrome 4 614701
Tags
Amber Amber List (moderate evidence)
SIK3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
  • Literature
Disease associations
  • Spondyloepimetaphyseal dysplasia, Krakow type - #618162
Tags
Amber Amber List (moderate evidence)
SLC13A1
4 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • sulfation-related bone disorder MONDO:0019688, SLC13A1-related
Tags
Amber Amber List (moderate evidence)
SLC35B2
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Disease associations
  • Leukodystrophy, hypomyelinating, 26, with chondrodysplasia, MIM# 620269
Tags
Amber Amber List (moderate evidence)
TAPT1
3 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Disease associations
  • Osteochondrodysplasia, complex lethal, Symoens-Barnes-Gistelinck type 616897
Tags
Amber Amber List (moderate evidence)
VPS35L
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Disease associations
  • Ritscher-Schinzel syndrome-3 (RTSC3), MIM#619135
Tags
Red Red List (low evidence)
ACVR2B
2 reviews
2 red
Unknown
Sources
  • Emory Genetics Laboratory
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Heterotaxy, visceral, 4, autosomal 613751
Tags
Red Red List (low evidence)
ADGRV1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
Tags
Red Red List (low evidence)
ADI1
1 review
1 red
Unknown
Sources
  • Expert Review Red
Disease associations
  • No OMIM or G2P phenotype
Tags
Red Red List (low evidence)
AHI1
2 reviews
2 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
AKT1
3 reviews
1 green
Unknown
Sources
  • Expert Review Green
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Cowden syndrome 6 615109
  • Proteus syndrome, somatic 176920
Tags
Red Red List (low evidence)
APC
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Syndromic disease, MONDO:0002254, APC-related
Tags
Red Red List (low evidence)
ARL13B
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
ATXN10
0 reviews
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
B9D2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 10 614175
Tags
Red Red List (low evidence)
BANF1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Nestor-Guillermo progeria syndrome 614008
Tags
Red Red List (low evidence)
BMP5
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Skeletal dysplasia, MONDO:0018230, BMP5-related
  • Skeletal dysostosis and atrioventricular septal defect
Tags
Red Red List (low evidence)
CCDC28B
3 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • {Bardet-Biedl syndrome 1, modifier of}, 209900
Tags
Red Red List (low evidence)
CCDC39
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CCDC40
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CD96
1 review
Not set
Sources
  • Expert Review Amber
  • Genetic Health Queensland
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • C-syndrome 217750 (opitz trigonocephaly)
Tags
Red Red List (low evidence)
CDC6
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Meier-Gorlin syndrome 5 613805
Tags
Red Red List (low evidence)
CDH23
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
CEP152
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Seckel syndrome 5, MIM# 613823
  • MONDO:0013443
Tags
Red Red List (low evidence)
CEP164
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CEP41
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CFTR
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CKAP2L
1 review
1 green
Not set
Sources
  • Expert Review Green
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Syndactyly with microcephaly and MR (Filippi syndrome) 272440
Tags
Red Red List (low evidence)
CLRN1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
COL12A1
1 review
1 green
Not set
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Joint hypermobility syndrome with myopathy (Zou (2014) Hum Mol Genet 23, 2339)
  • Bethlem-like myopathy (Hicks (2014) Hum Mol Genet 23,2353)
  • {Lung cancer, susceptibility to, association with}(Rudd (2006) Genome Res 16,693)
Tags
Red Red List (low evidence)
COL5A1
1 review
1 green
Not set
Sources
  • Expert
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
COLEC10
1 review
1 green
Not set
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • 3MC syndrome 3 -248340
Tags
Red Red List (low evidence)
CPLANE1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CRB1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
Tags
Red Red List (low evidence)
CRELD1
2 reviews
1 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CRX
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
Tags
Red Red List (low evidence)
DACT1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Literature
  • NHS GMS
  • Other
Disease associations
  • ?Townes-Brocks syndrome 2,617466
  • TBS2
Tags
Red Red List (low evidence)
DDX41
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Bone dysplasia, ichthyosis, and dysmorphism
Tags
Red Red List (low evidence)
DLX6
0 reviews
Unknown
Sources
  • Expert Review Red
  • NHS GMS
Disease associations
  • Split-hand/foot malformation 1 with sensorineural hearing loss 220600
  • Split-hand/foot malformation 1 183600
Tags
Red Red List (low evidence)
DNAAF1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAAF2
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAAF3
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAH11
2 reviews
2 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAH5
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
DNAI1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAI2
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAL1
1 review
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DOLPP1
0 reviews
Unknown
Sources
  • Expert Review Red
Disease associations
  • Ceroid lipofuscinosis, neuronal, 3 (required for efficient N-glycosylation CDG with skeletal features)
Tags
Red Red List (low evidence)
DPM2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type Iu 615042
Tags
Red Red List (low evidence)
DPM3
1 review
1 green
Unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Congenital disorder of glycosylation, type Io 612937
Tags
Red Red List (low evidence)
DSPP
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Dentin dysplasia, type II, 125420 -3
  • Dentinogenesis imperfecta, Shields type III, 125500
  • Dentinogenesis imperfecta, Shields type II, 125490
  • Deafness, autosomal dominant 36, with dentinogenesis, 605594
Tags
Red Red List (low evidence)
ENPP5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Skeletal dysplasia, MONDO:0018230, ENPP5-related
Tags
Red Red List (low evidence)
EP300
1 review
1 green
Not set
Sources
  • Expert Review Red
  • NHS GMS
Disease associations
  • Rubinstein Taybi syndrome
  • Rubinstein-Taybi syndrome 180849
Tags
Red Red List (low evidence)
ESR1
1 review
1 green
Not set
Sources
  • Expert
  • Expert Review Green
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
ETF1
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
FBLIM1
0 reviews
Not set
Sources
  • NHS GMS
Disease associations
  • Majeed syndrome (Chronic recurrent multifocal osteomyelitis with congenital dyserythropoietic anemia) 609628
Tags
Red Red List (low evidence)
FBLN1
2 reviews
2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Red
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Disease associations
  • Synpolydactyly, 3/3'4, associated with metacarpal and metatarsal synostoses 608180
Tags
Red Red List (low evidence)
FBXW4
1 review
1 red
Unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • UKGTN
Disease associations
  • Split-hand/foot malformation 3 syndrome 246560
Tags
Red Red List (low evidence)
FMN1
1 review
Unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • Expert Review Red
  • Literature
  • UKGTN
Disease associations
  • Animal models with skeletal dysplastic phenotypes
Tags
Red Red List (low evidence)
FOXC1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
FOXH1
1 review
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
GDF1
2 reviews
1 green 1 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
GDF3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Klippel-Feil anomaly with laryngeal malformation - 613702
Tags
Red Red List (low evidence)
GLIS2
1 review
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
GREM1
1 review
Unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Red
  • UKGTN
Tags
Red Red List (low evidence)
GUCY2D
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
HDAC5
0 reviews
Unknown
Sources
  • Expert list
  • Expert Review Red
Disease associations
  • osteoporosis
Tags
Red Red List (low evidence)
HDAC6
1 review
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Literature
Disease associations
  • chondrodysplasia MONDO:0022723
Tags
Red Red List (low evidence)
HOXA11
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
  • Expert Review Red
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Radioulnar synostosis with amegakaryocytic thrombocytopenia 1 605432
Tags
Red Red List (low evidence)
HOXD11
0 reviews
Not set
Sources
  • NHS GMS
Tags
Red Red List (low evidence)
IDH2
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • D-2-hydroxyglutaric aciduria 2 613657
  • Ollier disease/ Dyschondroplasia 166000
  • Maffucci syndrome 614569
  • Enchondromatosis (Ollier) and Enchondromatosis with hermangiomata (Maffucci) 166000, metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria (614875)
Tags
Red Red List (low evidence)
IFT88
0 reviews
Unknown
Sources
  • Expert list
  • Expert Review Red
  • UKGTN
Tags
Red Red List (low evidence)
INVS
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
IQCB1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
LAMA5
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Bent bone dysplasia syndrome 2, MIM# 620076
Tags
Red Red List (low evidence)
LCA5
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
Tags
Red Red List (low evidence)
LEFTY2
2 reviews
1 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
LOXL3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
  • Expert Review Red
Disease associations
  • Stickler syndrome
Tags
Red Red List (low evidence)
LRAT
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
LRP6
2 reviews
1 green
Not set
Sources
  • Expert
Tags
Red Red List (low evidence)
LTBP2
1 review
1 green
Not set
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Weill-Marchesani
Tags
Red Red List (low evidence)
MAN2C1
2 reviews
2 green
Unknown
Sources
  • Expert list
  • Expert Review Red
  • Literature
Disease associations
  • alpha-Mannosidosis
Tags
Red Red List (low evidence)
MCM5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Meier-Gorlin syndrome 8, MIM# 617564
Tags
Red Red List (low evidence)
MYO7A
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NEK8
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NEK9
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
Disease associations
  • NEK9-related lethal skeletal dysplasia MONDO:0014870
Tags
  • founder
Red Red List (low evidence)
NFATC2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Skeletal system disorder MONDO:0005172
Tags
Red Red List (low evidence)
NIN
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Seckel syndrome 7 614851
Tags
Red Red List (low evidence)
NKX2-5
2 reviews
2 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NME8
1 review
1 red
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
NODAL
2 reviews
2 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NPHP1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NPHP3
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Meckel syndrome 7 267010
Tags
Red Red List (low evidence)
NPHP4
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NPPC
1 review
1 red
Unknown
Sources
  • Expert list
  • Expert Review Red
Disease associations
  • Overgrowth syndrome with 2q37 translocations
Tags
Red Red List (low evidence)
OAT
1 review
1 green
Not set
Sources
  • Expert Review Red
  • NHS GMS
Disease associations
  • Gyrate atrophy of choroid and retina with or without ornithinemia 258870
Tags
Red Red List (low evidence)
OGFRL1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Cherubism (MONDO:0007315), OGFRL1-related
Tags
Red Red List (low evidence)
PCDH15
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
PIK3CA
1 review
1 green
Not set
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • CLOVES 612918
Tags
Red Red List (low evidence)
PIN1
0 reviews
Unknown
Sources
  • Expert list
  • Expert Review Red
Disease associations
  • No phenotype associated with this gene
Tags
Red Red List (low evidence)
PIR
0 reviews
Unknown
Sources
  • Expert Review Red
Disease associations
  • Osteoporosis
Tags
Red Red List (low evidence)
PKD2
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
PKHD1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
PLCB3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
Disease associations
  • Spondylometaphyseal dysplasia with corneal dystrophy, MIM# 618961
Tags
Red Red List (low evidence)
PLEKHM1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Osteopetrosis, autosomal recessive 6 - 611497
  • Osteopetrosis, autosomal recessive 6 611497
  • Osteopetrosis, autosomal dominant 3 - 618107
Tags
Red Red List (low evidence)
PLOD1
1 review
1 green
Not set
Sources
  • Expert
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
PTPRQ
1 review
1 green
Not set
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Short stature, onychodysplasia, facial dysmorphism, and hypotrichosis, 614813
Tags
Red Red List (low evidence)
RD3
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
RDH12
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
RPE65
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
RPGR
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
RPGRIP1
2 reviews
2 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review
Tags
Red Red List (low evidence)
RSPH4A
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
RSPH9
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
SCNN1A
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
SCNN1B
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
SCNN1G
2 reviews
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
SDCCAG8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Bardet-Biedl syndrome 16, 615993
Tags
Red Red List (low evidence)
SEM1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
Disease associations
  • SHFM1
Tags
Red Red List (low evidence)
SEMA3A
3 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • {Hypogonadotropic hypogonadism 16 with or without anosmia - MIM#614897
  • congenital heart disease
  • skeletal anomalies
Tags
Red Red List (low evidence)
SHH
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Preaxial polydactyly type 1 (PPD1)
Tags
Red Red List (low evidence)
SLCO5A1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Red
  • NHS GMS
Disease associations
  • Mesomelia-synostoses syndrome 600383
  • Mesomelia-synostoses syndrome 600383
Tags
Red Red List (low evidence)
SOX8
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Disease associations
  • Neurodevelopmental disorder (MONDO:0700092), SOX8-related
Tags
Red Red List (low evidence)
SPECC1L
1 review
1 green
Other
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Facial clefting, oblique, 1 600251
  • Opitz GBBB syndrome, type II 145410
  • Teebi hyperterorism like syndrome 145420
Tags
Red Red List (low evidence)
SRP54
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • 618752 NEUTROPENIA, SEVERE CONGENITAL, 8, AUTOSOMAL DOMINANT
  • SCN8
Tags
Red Red List (low evidence)
TCTN1
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
TDP2
1 review
1 green
Not set
Sources
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Disease associations
  • Dentinogenesis imperfecta, Shields type II, 125490
Tags
Red Red List (low evidence)
TGDS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Catel-Manzke syndrome 616145
Tags
Red Red List (low evidence)
THPO
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Thrombocythemia 1 187950 (rare presentation with congenital limb defects)
Tags
Red Red List (low evidence)
TMEM138
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
TMEM237
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
TMEM67
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • COACH syndrome 216360
  • Meckel syndrome 3 607361
  • {Bardet-Biedl syndrome 14, modifier of} 615991
  • Joubert syndrome 6 610688
Tags
Red Red List (low evidence)
TNXB
1 review
1 green
Not set
Sources
  • Expert
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
TOPORS
2 reviews
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review
Tags
Red Red List (low evidence)
TRIM32
2 reviews
1 green 1 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Expert Review Red
  • Victorian Clinical Genetics Services
Disease associations
  • Polydactyly
  • Bardet-Biedl syndrome 11, 615988
Tags
Red Red List (low evidence)
TRMT10A
1 review
1 green
Not set
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Microcephaly, short stature and impaired glucose metabolism, 616033
Tags
Red Red List (low evidence)
TSC1
0 reviews
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
TSC2
0 reviews
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
TULP1
2 reviews
2 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
UMOD
3 reviews
2 green 1 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
USH1C
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
USH1G
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
USH2A
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
VAC14
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
  • Victorian Clinical Genetics Services
Disease associations
  • Yunis-Varon syndrome (YVS) (includes multiple skeletal anomalies)
Tags
Red Red List (low evidence)
VHL
0 reviews
Not set
Sources
  • Emory Genetics Laboratory
Tags
Red Red List (low evidence)
WHRN
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
WNT3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Victorian Clinical Genetics Services
Disease associations
  • Tetra-amelia syndrome 273395
Tags
Red Red List (low evidence)
WRN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Red
  • NHS GMS
  • Victorian Clinical Genetics Services
Disease associations
  • Werner syndrome -277700
Tags
Red Red List (low evidence)
XPNPEP3
1 review
1 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
ZBTB16
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
  • Victorian Clinical Genetics Services
Disease associations
  • Skeletal defects, genital hypoplasia, and mental retardation 612447
Tags
Red Red List (low evidence)
ZIC3
2 reviews
2 green
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
ZNF423
2 reviews
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Amber
  • Royal Melbourne Hospital
  • Victorian Clinical Genetics Services
Tags

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